Pre_GI: BLASTP Hits

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Query: NC_013410:3280039:3335051 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3335051, End: 3335350, Length: 300

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011000:1216430:123483812348381235308471Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein6e-1579.3
NC_015563:2018038:202505120250512025653603Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein8e-1579
NC_007948:1574881:159162615916261592108483Polaromonas sp. JS666, complete genomehypothetical protein4e-1476.6
NC_008435:2658986:274788227478822748358477Rhodopseudomonas palustris BisA53, complete genomehypothetical protein2e-1168.2
NC_009720:622262:624915624915625409495Xanthobacter autotrophicus Py2, complete genomehypothetical protein3e-0960.5
NC_020211:103371:108408108408108896489Serratia marcescens WW4, complete genomehypothetical protein5e-0856.6
NC_004463:60225:642356423564690456Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein4e-0856.6
NC_017249:60216:642266422664681456Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-0856.6
NC_014965:997344:100323510032351003411177Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein2e-0650.8
NC_007490:76838:968309683097312483Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequencehypothetical protein5e-0649.7