Pre_GI: BLASTP Hits

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Query: NC_013410:3280039:3323910 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3323910, End: 3324428, Length: 519

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014640:6745873:676984867698486770432585Achromobacter xylosoxidans A8 chromosome, complete genometransferase hexapeptide family protein 51e-1995.5
NC_014206:3468500:347082834708283471460633Geobacillus sp. C56-T3 chromosome, complete genomesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family9e-1992.8
NC_016593:3402205:341881234188123419444633Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD1e-1892.4
NC_009484:318500:335990335990336634645Acidiphilium cryptum JF-5 chromosome, complete genomecarbonic anhydrase4e-1580.9
NC_015186:347346:367246367246367890645Acidiphilium multivorum AIU301, complete genomehypothetical protein4e-1580.9
NC_014931:5088125:509896350989635099544582Variovorax paradoxus EPS chromosome, complete genomeputative acetyltransferase4e-1580.9
NC_008700:2701500:271018927101892710767579Shewanella amazonensis SB2B, complete genomepilin glycosylation protein6e-1580.1
NC_005139:343500:371227371227371955729Vibrio vulnificus YJ016 chromosome I, complete sequenceputative acetyltransferase2e-1478.2
NC_011060:514874:516058516058516687630Pelodictyon phaeoclathratiforme BU-1, complete genometransferase hexapeptide repeat containing protein8e-1476.3
NC_011060:514874:558478558478559071594Pelodictyon phaeoclathratiforme BU-1, complete genomeputative acetyltransferase4e-1374.3
NC_005070:419261:451401451401452000600Synechococcus sp. WH 8102, complete genomeputative hexapeptide transferase family protein1e-1272.4
NC_008639:2968000:299306729930672993639573Chlorobium phaeobacteroides DSM 266, complete genomeputative acetyltransferase7e-1270.1
NC_009699:2875386:289729728972972897935639Clostridium botulinum F str. Langeland chromosome, complete genomehexapeptide repeat-containing transferase1e-1168.9
NC_013791:1291339:130136213013621301979618Bacillus pseudofirmus OF4 chromosome, complete genomeacetyltransferase2e-1168.6
NC_007575:601256:602407602407602982576Sulfurimonas denitrificans DSM 1251, complete genomeacetyl transferase3e-1168.2
NC_009439:2038303:206765220676522068239588Pseudomonas mendocina ymp, complete genomehypothetical protein3e-1167.8
NC_008260:1015447:103513210351321035758627Alcanivorax borkumensis SK2, complete genomeacyl-[acyl-carrier-protein]--UDP-N-acetylglucosa mine O-acylt6e-1167
NC_006138:23902:296802968030300621Desulfotalea psychrophila LSv54, complete genomepilin glycosylation protein7e-1166.6
NC_012881:4023895:404073040407304041350621Desulfovibrio salexigens DSM 2638, complete genometransferase hexapeptide repeat containing protein7e-1166.6
NC_005363:1604337:163537616353761635957582Bdellovibrio bacteriovorus HD100, complete genomeputative acetyltransferase1e-1066.2
NC_015690:3438288:345870934587093459305597Paenibacillus mucilaginosus KNP414 chromosome, complete genometransferase hexapeptide repeat containing protein1e-1065.9
NC_016935:3994500:401458540145854015181597Paenibacillus mucilaginosus 3016 chromosome, complete genometransferase hexapeptide repeat containing protein1e-1065.9
NC_015732:529201:553859553859554431573Spirochaeta caldaria DSM 7334 chromosome, complete genomesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family1e-1065.9
NC_008820:91967:111474111474112070597Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein2e-1065.5
NC_014006:2999500:301038230103823010969588Sphingobium japonicum UT26S chromosome 1, complete genomeputative acetyltransferase3e-1064.7
NC_007954:3171081:317886531788653179506642Shewanella denitrificans OS217, complete genomeputative acetyltransferase3e-1064.3
NC_007955:1664998:166719916671991667837639Methanococcoides burtonii DSM 6242, complete genometransferase hexapeptide repeat6e-1063.5
NC_014387:497883:548856548856549515660Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeacetyltransferase7e-1063.5
NC_013642:400651:428744428744429376633Thermotoga naphthophila RKU-10, complete genomesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family9e-1063.2
NC_016148:1877711:188324718832471883894648Thermovirga lienii DSM 17291 chromosome, complete genomesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family8e-1063.2
NC_009483:1936486:196980819698081970443636Geobacter uraniireducens Rf4 chromosome, complete genomeSerine acetyltransferase-like protein8e-1063.2
NC_015388:269301:304510304510305181672Desulfobacca acetoxidans DSM 11109 chromosome, complete genomesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family1e-0962.8
NC_014313:165490:183653183653184276624Hyphomicrobium denitrificans ATCC 51888 chromosome, completesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family3e-0961.2
NC_007796:2387002:239974023997402400372633Methanospirillum hungatei JF-1, complete genometransferase hexapeptide repeat4e-0960.8
NC_011899:1807365:181500318150031815632630Halothermothrix orenii H 168, complete genometransferase hexapeptide repeat protein5e-0960.5
NC_008570:3220539:325324632532463253863618Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeacetyltransferase7e-0960.1
NC_008593:980731:993300993300993938639Clostridium novyi NT, complete genomehexapeptide transferase family protein7e-0960.1
NC_014974:246404:259975259975260607633Thermus scotoductus SA-01 chromosome, complete genomeacetyltransferase with multiple hexapeptide repeat domains8e-0959.7
NC_010336:1248071:127161312716131272194582Francisella philomiragia subsp. philomiragia ATCC 25017, completeacetyl transferase1e-0859.3
NC_011145:4960940:496485349648534965476624Anaeromyxobacter sp. K, complete genomepilin glycosylation protein2e-0858.9
NC_013730:6901725:692310769231076923739633Spirosoma linguale DSM 74, complete genomesugar O-acyltransferase, sialic acid O- acetyltransferase NeuD family5e-0857.4
NC_007347:1215358:122313812231381223809672Ralstonia eutropha JMP134 chromosome 1, complete sequencetransferase hexapeptide repeat5e-0857
NC_011831:2410607:244564724456472446336690Chloroflexus aggregans DSM 9485, complete genomehexapaptide repeat-containing transferase2e-0755.5
NC_014973:1767798:176952217695221770160639Geobacter sp. M18 chromosome, complete genomesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family2e-0755.1
NC_011891:4931961:493585949358594936443585Anaeromyxobacter dehalogenans 2CP-1, complete genomepilin glycosylation protein3e-0754.7
NC_017075:4421486:443298144329814433622642Rubrivivax gelatinosus IL144, complete genomeputative transferase5e-0753.9
NC_019904:2095971:211686121168612117496636Echinicola vietnamensis DSM 17526 chromosome, complete genomesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family7e-0753.5
NC_012491:5628000:564110956411095641741633Brevibacillus brevis NBRC 100599, complete genomehypothetical protein7e-0753.5
NC_013522:736339:736339736339737004666Thermanaerovibrio acidaminovorans DSM 6589, complete genomecarbonic anhydrase1e-0652.8
NC_007517:2632233:264067626406762641338663Geobacter metallireducens GS-15, complete genometransferase hexapeptide repeat protein1e-0652.4
NC_018080:1834754:185937218593721860007636Pseudomonas aeruginosa DK2 chromosome, complete genomeTrimeric LpxA-like family protein2e-0652
NC_014387:2661496:267818626781862678842657Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeacetyltransferase2e-0652
NC_006958:359760:386557386557387204648Corynebacterium glutamicum ATCC 13032, complete genomePUTATIVE ACETYL TRANSFERASE PROTEIN2e-0652
NC_003450:359759:386556386556387203648Corynebacterium glutamicum ATCC 13032, complete genomeacetyltransferase2e-0652
NC_017187:641822:647410647410647985576Arcobacter butzleri ED-1, complete genomeacetyl transferase2e-0652
NC_015703:6295500:631375063137506314382633Runella slithyformis DSM 19594 chromosome, complete genomesugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family3e-0651.2
NC_007677:771168:796509796509797138630Salinibacter ruber DSM 13855, complete genomepilin glycosylation protein PglB8e-0649.7