Pre_GI: BLASTP Hits

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Query: NC_013410:3280039:3310096 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3310096, End: 3311958, Length: 1863

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015500:900807:913788913788914774987Treponema brennaborense DSM 12168 chromosome, complete genomeBeta-ketoacyl-acyl-carrier-protein synthase III2e-1687.8
NC_013410:3280039:3294591329459132956221032Fibrobacter succinogenes subsp. succinogenes S85 chromosome,family 2 glycosyl transferase1e-1895.1
NC_002755:1684161:1707684170768417088051122Mycobacterium tuberculosis CDC1551, complete genomeglycosyl transferase4e-1583.6
NC_009525:1685522:1709046170904617100561011Mycobacterium tuberculosis H37Ra, complete genomeglycosyl transferase6e-1583.2
NC_014935:1704816:172536617253661726358993Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeglycosyl transferase family 21e-1895.1
NC_015556:4543380:455458545545854555427843Pseudomonas fulva 12-X chromosome, complete genomeglycosyl transferase family 23e-1170.9
NC_015160:3556114:3571838357183835728841047Odoribacter splanchnicus DSM 20712 chromosome, complete genomeglycosyl transferase family 24e-1480.1
NC_011026:2533017:255520325552032556114912Chloroherpeton thalassium ATCC 35110, complete genomeglycosyl transferase family 21e-1379
NC_009483:2640403:271516827151682716118951Geobacter uraniireducens Rf4 chromosome, complete genomeglycosyl transferase family protein4e-1584
NC_017098:32196:415994159942576978Spirochaeta africana DSM 8902 chromosome, complete genomeglycosyl transferase family protein4e-1480.1
NC_014387:2661496:2673176267317626744981323Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeglycosyl transferase GT2 family protein2e-1274.3
NC_007413:2961611:2968932296893229707221791Anabaena variabilis ATCC 29413, complete genomeGlycosyl transferase, family 24e-1273.9
NC_008750:1659095:166141216614121662359948Shewanella sp. W3-18-1, complete genomeglycosyl transferase, family 28e-1065.9
NC_007512:865500:881165881165882154990Pelodictyon luteolum DSM 273, complete genomeGlycosyltransferase involved in cell wall biogenesis-like6e-1066.6
NC_003272:637970:6484826484826502721791Nostoc sp. PCC 7120, complete genomehypothetical protein1e-1379
NC_000962:1684005:1707529170752917085391011Mycobacterium tuberculosis H37Rv, complete genomeprobable sugar transferase6e-1583.2
NC_016804:1679357:1693648169364816946881041Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative sugar transferase1e-20101
NC_015848:1708176:1731707173170717327171011Mycobacterium canettii CIPT 140010059, complete genomeputative sugar transferase6e-1583.2
NC_019950:1689910:1715791171579117168791089Mycobacterium canettii CIPT 140060008 complete genomePutative sugar transferase8e-21102
NC_012207:1681971:1696262169626216973021041Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative sugar transferase1e-20101
NC_019950:1689910:1712292171229217133021011Mycobacterium canettii CIPT 140060008 complete genomePutative sugar transferase6e-1583.2
NC_008769:1709078:1723369172336917244091041Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative sugar transferase1e-20101
NC_017026:1686500:170856517085651709551987Mycobacterium tuberculosis RGTB327 chromosome, complete genomeputative sugar transferase2e-1481.3
NC_002945:1680751:1695041169504116960811041Mycobacterium bovis AF2122/97, complete genomesugar transferase1e-20101