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Query: NC_013410:3280039:3306309 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3306309, End: 3307208, Length: 900

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015216:405657:407052407052407951900Methanobacterium sp. AL-21 chromosome, complete genomehypothetical protein8e-105380
NC_015574:2057602:206097620609762061878903Methanobacterium sp. SWAN-1 chromosome, complete genomehypothetical protein8e-103373
NC_006510:1995916:200340120034012004357957Geobacillus kaustophilus HTA426, complete genomehypothetical protein6e-70264
NC_014206:1618988:163451616345161635472957Geobacillus sp. C56-T3 chromosome, complete genomehypothetical protein3e-69262
NC_008148:583030:582098582098583033936Rubrobacter xylanophilus DSM 9941, complete genomehypothetical protein3e-54211