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Query: NC_013410:3280039:3303900 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3303900, End: 3305033, Length: 1134

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013929:7117326:7132315713231571334811167Streptomyces scabiei 87.22 chromosome, complete genomeATP/GTP-binding protein4e-68258
NC_016641:2700765:2722788272278827238971110Paenibacillus terrae HPL-003 chromosome, complete genomecitrate lyase subunit beta6e-68258
NC_021177:2185898:2188497218849721896691173Streptomyces fulvissimus DSM 40593, complete genomeATP/GTP-binding protein7e-64244
NC_015953:2059083:2061638206163820628011164Streptomyces sp. SirexAA-E chromosome, complete genomeputative ATP/GTP-binding protein1e-63243
NC_015957:8569721:8573309857330985744991191Streptomyces violaceusniger Tu 4113 chromosome, complete genomeATP/GTP-binding protein9e-61234
NC_009778:1717458:173124217312421732198957Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-34145
NC_014563:19307:234092340924347939Pantoea vagans C9-1 plasmid pPag2, complete sequencehypothetical protein6e-33142
NC_008760:27967:479854798548932948Polaromonas naphthalenivorans CJ2 plasmid pPNAP04, completeATP/GTP-binding protein4e-1479.3