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Query: NC_013410:3280039:3293989 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3293989, End: 3294540, Length: 552

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014377:210888:2217072217072227321026Thermosediminibacter oceani DSM 16646 chromosome, complete genomecoenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein6e-1270.5
NC_013173:2884887:2903355290335529045541200Desulfomicrobium baculatum DSM 4028, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein4e-0961.2
NC_014624:1840209:1851948185194818531141167Eubacterium limosum KIST612 chromosome, complete genomequinone oxidoreductase7e-0857
NC_015500:1923514:1955236195523619564711236Treponema brennaborense DSM 12168 chromosome, complete genomecoenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein2e-0755.5
NC_015437:27325:4804848048491901143Selenomonas sputigena ATCC 35185 chromosome, complete genomecoenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein3e-0651.6
NC_014387:993013:1001537100153710027031167Butyrivibrio proteoclasticus B316 chromosome 1, complete genomecoenzyme F420-reducing hydrogenase beta subunit5e-0650.8
NC_018604:1556425:1570779157077915733912613Brachyspira pilosicoli WesB complete genomecoenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein9e-0650.1