Pre_GI: BLASTP Hits

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Query: NC_013410:3280039:3290799 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3290799, End: 3291953, Length: 1155

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015164:325212:3353993353993365321134Bacteroides salanitronis DSM 18170 chromosome, complete genomeglycosyl transferase group 13e-26119
NC_014814:4235477:4276073427607342771911119Mycobacterium sp. Spyr1 chromosome, complete genomeglycosyltransferase1e-25117
NC_019757:4878417:4896977489697748980891113Cylindrospermum stagnale PCC 7417, complete genomeglycosyltransferase1e-22107
NC_009464:1479174:1502079150207915031371059Uncultured methanogenic archaeon RC-I, complete genomeglycosyltransferase (group 1)7e-2098.6
NC_013967:1878045:1901202190120219023201119Haloferax volcanii DS2 chromosome, complete genomelipopolysaccharide transferase family protein2e-1997.4
NC_011059:1896593:1913697191369719147761080Prosthecochloris aestuarii DSM 271, complete genomeglycosyl transferase group 17e-1995.5
NC_014484:1690272:1724519172451917258741356Spirochaeta thermophila DSM 6192 chromosome, complete genomeglycosyl transferase group 13e-1893.2
NC_003901:1947491:1956060195606019571451086Methanosarcina mazei Go1, complete genomeglycosyltransferase5e-1789
NC_020389:1683120:1692575169257516936421068Methanosarcina mazei Tuc01, complete genomeglycosyltransferase5e-1789
NC_014408:682689:7018427018427029781137Methanothermobacter marburgensis str. Marburg chromosome, completeglycosyltransferase1e-1687.8
NC_007614:261588:2677142677142688381125Nitrosospira multiformis ATCC 25196 chromosome 1, completeGlycosyl transferase, group 15e-1582.4
NC_009615:3308538:3311023331102333121501128Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein6e-1582
NC_009523:1365717:1379801137980113809911191Roseiflexus sp. RS-1 chromosome, complete genomegroup 1 glycosyl transferase2e-1480.9
NC_018515:4334240:4335391433539143364701080Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeglycosyltransferase3e-1479.7
NC_013741:424278:4370554370554381941140Archaeoglobus profundus DSM 5631, complete genomeglycosyl transferase group 13e-1479.7
NC_007796:3116293:3139661313966131408271167Methanospirillum hungatei JF-1, complete genomeglycosyl transferase, group 16e-1479
NC_015320:470988:4907064907064918571152Archaeoglobus veneficus SNP6 chromosome, complete genomegroup 1 glycosyl transferase7e-1478.6
NC_017068:638868:6477586477586488911134Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative glycosyl transferase family 1 protein1e-1377.8
NC_010634:1175404:1190866119086611919751110Yersinia pseudotuberculosis PB1/+, complete genomeglycosyl transferase group 18e-1375.1
NC_015955:581685:5905235905235915961074Halophilic archaeon DL31 plasmid phalar01, complete sequencegroup 1 glycosyl transferase1e-1274.7
NC_014160:539347:5530695530695541931125Thermosphaera aggregans DSM 11486 chromosome, complete genomegroup 1 glycosyltransferase2e-1273.9
NC_016070:1178462:1204843120484312059821140Thermoproteus tenax Kra 1, complete genomeLPS biosynthesis glycosyltransferase3e-1273.2
NC_008639:2786447:2817352281735228185001149Chlorobium phaeobacteroides DSM 266, complete genomeglycosyl transferase, group 13e-1273.2
NC_011060:244949:2485572485572496331077Pelodictyon phaeoclathratiforme BU-1, complete genomeglycosyl transferase group 16e-1272
NC_012108:2874831:289323428932342894067834Desulfobacterium autotrophicum HRM2, complete genomeputative lipopolysaccharide N-acetyl-glycoaminyltransferase7e-1168.6
NC_006461:605249:6135106135106145231014Thermus thermophilus HB8, complete genomeputative glycosyltransferase7e-1168.6
NC_007947:2140000:2154294215429421554421149Methylobacillus flagellatus KT, complete genomeglycosyl transferase, group 17e-1168.6
NC_011757:4445343:4475916447591644770821167Methylobacterium chloromethanicum CM4, complete genomeglycosyl transferase group 11e-1068.2
NC_010524:2530841:2545323254532325463751053Leptothrix cholodnii SP-6, complete genomeglycosyl transferase group 11e-1067.8
NC_007645:1033834:1052908105290810540411134Hahella chejuensis KCTC 2396, complete genomeGlycosyltransferase1e-1067.4
NC_012804:816961:8368448368448383551512Thermococcus gammatolerans EJ3, complete genomeGlycosyltransferase, family 12e-1067
NC_003888:4613000:4613136461313646146261491Streptomyces coelicolor A3(2), complete genomeglycosyltransferase3e-1066.6
NC_003155:4906639:4926336492633649277301395Streptomyces avermitilis MA-4680, complete genomeglycosyl transferase4e-1066.2
NC_011145:4960940:4968973496897349701691197Anaeromyxobacter sp. K, complete genomeglycosyl transferase group 14e-1066.2
NC_013194:3724500:3740722374072237419241203Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeglycosyl transferase group 17e-1065.5
NC_003901:775500:7780917780917792451155Methanosarcina mazei Go1, complete genomeglycosyltransferase7e-1065.5
NC_007955:742834:7522887522887534091122Methanococcoides burtonii DSM 6242, complete genomeglycosyl transferase, group 17e-1065.1
NC_020453:936396:949236949236950183948Agromonas oligotrophica S58 DNA, complete genomeWffQ protein2e-0964.3
NC_016645:1677703:1692775169277516939231149Pyrobaculum sp. 1860 chromosome, complete genomegroup 1 glycosyl transferase2e-0963.9
NC_014153:2282725:2292111229211122932861176Thiomonas intermedia K12 chromosome, complete genomeglycosyl transferase group 12e-0963.5
NC_015636:966000:9913859913859925001116Methanothermococcus okinawensis IH1 chromosome, complete genomegroup 1 glycosyl transferase2e-0963.5
NC_020054:1002906:1017010101701010181971188Fibrella aestuarina BUZ 2 drat genomeglycosyl transferase group 13e-0963.2
NC_016514:3048883:3060908306090830619811074Enterobacter cloacae EcWSU1 chromosome, complete genomeGDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase3e-0963.2
NC_013205:289291:3109463109463120701125Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,glycosyl transferase group 14e-0962.8
NC_009954:1520417:1522493152249315236321140Caldivirga maquilingensis IC-167, complete genomeglycosyl transferase group 14e-0962.8
NC_018876:703633:7134267134267145531128Methanolobus psychrophilus R15 chromosome, complete genomeglycosyl transferase, group 14e-0962.8
NC_009051:657000:6721416721416732231083Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, group 17e-0962
NC_017954:161787:1794091794091805391131Thermogladius cellulolyticus 1633 chromosome, complete genomegroup 1 glycosyl transferase1e-0861.6
NC_014500:564864:5767395767395779501212Dickeya dadantii 3937 chromosome, complete genomeputative glycosyltransferase protein1e-0861.2
NC_012912:4012112:4028905402890540301161212Dickeya zeae Ech1591, complete genomeglycosyl transferase group 11e-0861.2
NC_017323:599549:6278196278196290691251Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequencegroup 1 glycosyl transferase2e-0860.8
NC_015151:1063617:1067815106781510689421128Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeglycosyl transferase group 12e-0860.8
NC_010612:957786:9747309747309761301401Mycobacterium marinum M, complete genomemannosyltransferase2e-0860.5
NC_013592:577831:5835715835715847821212Dickeya dadantii Ech586, complete genomeglycosyl transferase group 12e-0860.5
NC_020133:902000:9184469184469198461401Mycobacterium liflandii 128FXT, complete genomemannosyltransferase2e-0860.1
NC_013037:48900:6633066330674361107Dyadobacter fermentans DSM 18053, complete genomeglycosyl transferase group 13e-0860.1
NC_008228:1307943:1308780130878013098711092Pseudoalteromonas atlantica T6c, complete genomeglycosyl transferase, group 15e-0859.3
NC_011959:1965158:1983329198332919845161188Thermomicrobium roseum DSM 5159, complete genomeglycosyl transferase5e-0859.3
NC_015315:1:1513215132163401209Thermoproteus uzoniensis 768-20 chromosome, complete genomefamily 1 glycosyl transferase5e-0859.3
NC_009635:61344:6134461344624381095Methanococcus aeolicus Nankai-3 chromosome, complete genomegroup 1 glycosyl transferase4e-0859.3
NC_018876:2305659:2329918232991823310601143Methanolobus psychrophilus R15 chromosome, complete genomephosphatidylinositol glycan-class A5e-0858.9
NC_016603:3181592:3190139319013931913081170Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeglycoside hydrolase family protein6e-0858.9
NC_000854:723000:7456957456957467861092Aeropyrum pernix K1, complete genomeglycosyl transferase, group 16e-0858.9
NC_003901:1346281:1346281134628113474861206Methanosarcina mazei Go1, complete genomeglycosyltransferase7e-0858.9
NC_016613:221476:2364022364022375411140Vibrio sp. EJY3 chromosome 1, complete sequenceglycosyltransferase9e-0858.5
NC_013156:127000:1453191453191463681050Methanocaldococcus fervens AG86, complete genomeglycosyl transferase group 18e-0858.5
NC_000917:532500:5463075463075473981092Archaeoglobus fulgidus DSM 4304, complete genomefirst mannosyl transferase (wbaZ-2)8e-0858.5
NC_018679:4028412:4035220403522040375892370Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeglycosyl transferase family 21e-0758.2
NC_015690:977131:9924329924329934961065Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein1e-0757.8
NC_003552:2674385:2678967267896726801301164Methanosarcina acetivorans C2A, complete genomephosphatidylinositol glycan-class A2e-0757.4
NC_015389:1298689:1315763131576313169291167Coriobacterium glomerans PW2 chromosome, complete genomeglycosyl transferase group 12e-0757.4
NC_015510:3641676:3657742365774236588001059Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomegroup 1 glycosyl transferase2e-0757.4
NC_018876:516220:5279845279845291231140Methanolobus psychrophilus R15 chromosome, complete genomeLPS glycosyltransferase2e-0757
NC_009454:358044:3697703697703708941125Pelotomaculum thermopropionicum SI, complete genomeglycosyltransferase2e-0757
NC_009051:657000:6686956686956698281134Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, group 13e-0756.6
NC_003869:948000:9528129528129539361125Thermoanaerobacter tengcongensis MB4, complete genomepredicted glycosyltransferase3e-0756.6
NC_014033:1691822:1712498171249817136401143Prevotella ruminicola 23 chromosome, complete genomegroup 1 family glycosyltransferase4e-0756.2
NC_014216:2127370:2138211213821121406072397Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeglycosyl transferase family 24e-0756.2
NC_009615:3904962:3913207391320739143341128Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein6e-0755.8
NC_000918:336232:3505683505683516741107Aquifex aeolicus VF5, complete genomemannosyltransferase C6e-0755.5
NC_009614:3081190:3082668308266830838941227Bacteroides vulgatus ATCC 8482 chromosome, complete genomeglycosyl transferase family protein9e-0755.1
NC_019757:4739206:4749047474904747501681122Cylindrospermum stagnale PCC 7417, complete genomeglycosyltransferase9e-0755.1
NC_015675:2697131:2703058270305827041821125Mesorhizobium opportunistum WSM2075 chromosome, complete genomegroup 1 glycosyl transferase9e-0755.1
NC_014374:669356:6895196895196906401122Acidilobus saccharovorans 345-15 chromosome, complete genomeglycosyl transferase group 19e-0755.1
NC_015216:1278706:1317809131780913189271119Methanobacterium sp. AL-21 chromosome, complete genomegroup 1 glycosyl transferase8e-0755.1
NC_009051:930758:9400869400869412461161Methanoculleus marisnigri JR1, complete genomeglycosyl transferase, group 18e-0755.1
NC_016112:3103716:3127753312775331289101158Methylomicrobium alcaliphilum chromosome, complete genomesugar transferase1e-0654.7
NC_008752:1025980:1044117104411710453101194Acidovorax avenae subsp. citrulli AAC00-1, complete genomeglycosyl transferase, group 11e-0654.7
NC_015416:1039144:1051041105104110522161176Methanosaeta concilii GP-6 chromosome, complete genomeglycosyl transferase group 1 family protein1e-0654.7
NC_011138:1374520:1394780139478013958591080Alteromonas macleodii 'Deep ecotype', complete genomeglycosyl transferase, group 1 family protein2e-0654.3
NC_015675:2697131:2701943270194327030611119Mesorhizobium opportunistum WSM2075 chromosome, complete genomegroup 1 glycosyl transferase2e-0654.3
NC_017262:623351:6292926292926305481257Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, completegroup 1 glycosyl transferase1e-0654.3
NC_014537:453644:4568174568174579471131Vulcanisaeta distributa DSM 14429 chromosome, complete genomeglycosyl transferase group 1 protein2e-0653.9
NC_013222:721384:7278927278927290311140Robiginitalea biformata HTCC2501, complete genomeGlycosyltransferase2e-0653.9
NC_014010:1020488:1029162102916210302111050Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeprobable glycosyltransferase protein2e-0653.9
NC_008228:1404126:1431559143155914326411083Pseudoalteromonas atlantica T6c, complete genomeglycosyl transferase, group 12e-0653.5
NC_019942:686564:7133087133087144171110Aciduliprofundum sp. MAR08-339, complete genomeglycosyltransferase3e-0653.1
NC_014408:682689:6983656983656995131149Methanothermobacter marburgensis str. Marburg chromosome, completeglycosyltransferase5e-0652.4
NC_008260:1015447:1027727102772710288301104Alcanivorax borkumensis SK2, complete genomeglycosyl transferase, putative5e-0652.4
NC_007575:1484305:1483211148321114843081098Sulfurimonas denitrificans DSM 1251, complete genomeglycosyl transferase, group 17e-0652
NC_010334:1783500:1798798179879817999941197Shewanella halifaxensis HAW-EB4, complete genomeglycosyl transferase group 17e-0652
NC_019978:2396000:2398349239834923994431095Halobacteroides halobius DSM 5150, complete genomeglycosyltransferase7e-0652