Pre_GI: BLASTP Hits

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Query: NC_013410:3192836:3201482 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3201482, End: 3202771, Length: 1290

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013410:3192836:3198647319864732000801434Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein8e-109394
NC_013410:3192836:3200137320013732014591323Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein1e-100367
NC_013410:3192836:3204081320408132055411461Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein2e-88326
NC_015690:3477573:347757334775733478433861Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative transcriptional regulator2e-1067.4
NC_015144:545999:5552635552635567261464Weeksella virosa DSM 16922 chromosome, complete genomegliding motility-associated lipoprotein GldK2e-0757.4
NC_015177:2972701:299951929995193000352834Pedobacter saltans DSM 12145 chromosome, complete genomeprotein of unknown function DUF3236e-0652.4