Pre_GI: BLASTP Hits

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Query: NC_013410:3192836:3192836 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3192836, End: 3197287, Length: 4452

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014484:1690272:1690272169027216947054434Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein01527
NC_015578:1430112:1430112143011214345364425Treponema primitia ZAS-2 chromosome, complete genomeCoA enzyme activase01456
NC_017098:1542284:1577543157754315820184476Spirochaeta africana DSM 8902 chromosome, complete genomeactivator of 2-hydroxyglutaryl-CoA dehydratase01455
NC_009922:2323083:2344275234427523485614287Alkaliphilus oremlandii OhILAs, complete genomeputative CoA-substrate-specific enzyme activase0874
NC_009012:1595498:1613874161387416181754302Clostridium thermocellum ATCC 27405, complete genomeputative CoA-substrate-specific enzyme activase0869
NC_021184:569653:5696535696535739394287Desulfotomaculum gibsoniae DSM 7213, complete genomehypothetical protein0856
NC_016627:3205333:3228073322807332323774305Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein0837
NC_013171:342714:3533263533263576004275Anaerococcus prevotii DSM 20548, complete genomeCoA-substrate-specific enzyme activase0832
NC_015275:2712991:2712991271299127172114221Clostridium lentocellum DSM 5427 chromosome, complete genomeCoA-substrate-specific enzyme activase0810
NC_020291:1535402:1557937155793715621694233Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative CoA-substrate-specific enzyme activase0800
NC_017214:191791:2120042120042167644761Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeActivator of (R)-2-hydroxyglutaryl-CoA dehydratase0771
NC_017215:1499179:1519392151939215241524761Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Activator of (R)-2-hydroxyglutaryl-CoA dehydratase0771
NC_017217:1499832:1520045152004515247634719Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein0770
NC_012814:1494331:1514758151475815194764719Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein0770
NC_012815:1494263:1514476151447615191944719Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein0770
NC_011835:625472:6456876456876503544668Bifidobacterium animalis subsp. lactis AD011 chromosome, completeactivator of 2-hydroxyglutaryl-CoA dehydratase0770
NC_017216:1494190:1514403151440315190794677Bifidobacterium animalis subsp. lactis BLC1, complete genomeputative CoA-substrate-specific enzyme activase0770
NC_020134:1243122:1240063124006312431493087Clostridium stercorarium subsp. stercorarium DSM 8532, completeCoA-substrate-specific enzyme activase0652
NC_010814:3048441:3088379308837930908232445Geobacter lovleyi SZ, complete genome2e-162574
NC_014926:608894:6294446294446326473204Thermovibrio ammonificans HB-1 chromosome, complete genomeCoA-substrate-specific enzyme activase1e-141505
NC_009483:1779601:1791041179104117941513111Geobacter uraniireducens Rf4 chromosome, complete genomeputative CoA-substrate-specific enzyme activase2e-106387
NC_011145:4365730:4365730436573043699984269Anaeromyxobacter sp. K, complete genomeCoA-substrate-specific enzyme activase1e-66255
NC_015732:2762424:2777720277772027823304611Spirochaeta caldaria DSM 7334 chromosome, complete genomeCoA-substrate-specific enzyme activase1e-59233
NC_010003:1746319:1755877175587717603404464Petrotoga mobilis SJ95, complete genomeCoA-substrate-specific enzyme activase2e-55218
NC_014377:1227850:122938612293861230357972Thermosediminibacter oceani DSM 16646 chromosome, complete genomeCoA-substrate-specific enzyme activase3e-54214
NC_020134:1243122:1243122124312212443811260Clostridium stercorarium subsp. stercorarium DSM 8532, completehypothetical protein4e-51204
NC_021182:4088000:410867741086774109630954Clostridium pasteurianum BC1, complete genomeCoA-substrate-specific enzyme activase, putative8e-48193
NC_016584:1436710:145659314565931457555963Desulfosporosinus orientis DSM 765 chromosome, complete genomeCoA-substrate-specific enzyme activase1e-43179
NC_010718:128423:128423128423129397975Natranaerobius thermophilus JW/NM-WN-LF, complete genomeCoA-substrate-specific enzyme activase7e-43177
NC_011830:633195:6391766391766402791104Desulfitobacterium hafniense DCB-2, complete genomeCoA-substrate-specific enzyme activase4e-42174
NC_010516:3466000:347106934710693472043975Clostridium botulinum B1 str. Okra, complete genomeputative CoA-substrate-specific enzyme activase8e-40167
NC_009698:3275839:327583932758393276813975Clostridium botulinum A str. Hall chromosome, complete genomeCoA-substrate-specific enzyme activase7e-40167
NC_015425:2528549:256470925647092565647939Clostridium botulinum BKT015925 chromosome, complete genomeputative CoA-substrate-specific enzyme activase2e-38162
NC_014314:576465:604657604657605466810Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeCoA-substrate-specific enzyme activase3e-36155
NC_014377:1227850:1231413123141312324231011Thermosediminibacter oceani DSM 16646 chromosome, complete genomeProtein of unknown function DUF2229, CoA enzyme activase3e-26122
NC_009464:3058665:3079639307963930808951257Uncultured methanogenic archaeon RC-I, complete genomeputative 2-hydroxyglutaryl-CoA dehydratase activator, component C (archerase)2e-25119
NC_007503:1047577:1054611105461110562631653Carboxydothermus hydrogenoformans Z-2901, complete genomeputative CoA dehydratase subunit/(R)-2-hydroxyglutaryl-CoA dehydratase activator5e-25117
NC_009698:3359766:337091433709143371708795Clostridium botulinum A str. Hall chromosome, complete genomeR-phenyllactate dehydratase activator3e-24115
NC_009697:3463736:347380634738063474600795Clostridium botulinum A str. ATCC 19397 chromosome, completeR-phenyllactate dehydratase activator3e-24115
NC_012563:3729817:373987437398743740668795Clostridium botulinum A2 str. Kyoto, complete genomeR-phenyllactate dehydratase activator1e-23113
NC_014253:1818000:1828187182818718294431257Methanohalobium evestigatum Z-7303 chromosome, complete genomemethanogenesis marker protein 151e-23113
NC_010516:3545017:355872635587263559520795Clostridium botulinum B1 str. Okra, complete genomeR-phenyllactate dehydratase activator1e-23113
NC_009699:3581376:359145035914503592244795Clostridium botulinum F str. Langeland chromosome, complete genomeR-phenyllactate dehydratase activator1e-23113
NC_012658:2393427:239804723980472398820774Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative CoA-substrate-specific enzyme activase2e-23112
NC_010516:2374000:237800923780092378782774Clostridium botulinum B1 str. Okra, complete genome2-hydroxyglutaryl-CoA dehydratase component A2e-23112
NC_017179:446564:452637452637453437801Clostridium difficile BI1, complete genomeactivator of 2-hydroxyisocaproyl-CoA dehydratase2e-23112
NC_013315:435599:443065443065443874810Clostridium difficile CD196 chromosome, complete genomeactivator of 2-hydroxyisocaproyl-CoA dehydratase2e-23112
NC_012563:2466000:2483195248319524848861692Clostridium botulinum A2 str. Kyoto, complete genomebenzoyl-CoA reductase, subunit A3e-23112
NC_010516:2374000:2391090239109023927841695Clostridium botulinum B1 str. Okra, complete genomeputative R-2-hydroxyglutaryl-CoA dehydratase subunit/putative R-2-hydroxyglutaryl-CoA dehydratase activase1e-22110
NC_003454:822804:832898832898833695798Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeActivator of (R)-2-hydroxyglutaryl-CoA dehydratase1e-22110
NC_012563:2466000:246994924699492470722774Clostridium botulinum A2 str. Kyoto, complete genome2-hydroxyglutaryl-CoA dehydratase component A9e-23110
NC_018876:1551155:1551155155115515523961242Methanolobus psychrophilus R15 chromosome, complete genomeBadF/BadG/BcrA/BcrD ATPase8e-23110
NC_009698:2265475:227009222700922270865774Clostridium botulinum A str. Hall chromosome, complete genome2-hydroxyglutaryl-CoA dehydratase2e-22109
NC_009697:2265409:227002622700262270799774Clostridium botulinum A str. ATCC 19397 chromosome, complete2-hydroxyglutaryl-CoA dehydratase subunit A2e-22109
NC_009697:2265409:2283125228312522848191695Clostridium botulinum A str. ATCC 19397 chromosome, completeR-2-hydroxyglutaryl-CoA dehydratase subunit/ R-2-hydroxyglutaryl-CoA dehydratase activase2e-22109
NC_010520:3526883:352971535297153530473759Clostridium botulinum A3 str. Loch Maree, complete genomeputative CoA-substrate-specific enzyme activase5e-22108
NC_009943:1043210:104577010457701046591822Candidatus Desulfococcus oleovorans Hxd3, complete genomeputative CoA-substrate-specific enzyme activase5e-22108
NC_012658:2393427:2410751241075124124421692Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative CoA-substrate-specific enzyme activase2e-22108
NC_013887:189400:192714192714193445732Methanocaldococcus sp. FS406-22 chromosome, complete genomeCoA-substrate-specific enzyme activase7e-21104
NC_015574:1676798:1682748168274816839831236Methanobacterium sp. SWAN-1 chromosome, complete genomemethanogenesis marker protein 151e-20103
NC_007519:64157:819938199382772780Desulfovibrio alaskensis G20 chromosome, complete genomeCoA enzyme activase2e-20102
NC_015216:652266:6617006617006629321233Methanobacterium sp. AL-21 chromosome, complete genomemethanogenesis marker protein 155e-20101
NC_011832:1148859:117832011783201179126807Candidatus Methanosphaerula palustris E1-9c, complete genomeCoA-substrate-specific enzyme activase4e-20101
NC_015562:1189111:121368012136801214414735Methanotorris igneus Kol 5 chromosome, complete genomeCoA-substrate-specific enzyme activase1e-1999.8
NC_014828:2038692:208228120822812083090810Ethanoligenens harbinense YUAN-3 chromosome, complete genomeCoA-substrate-specific enzyme activase7e-1997.4
NC_016584:1436710:145753614575361458522987Desulfosporosinus orientis DSM 765 chromosome, complete genomehypothetical protein2e-1896.3
NC_015589:2846000:286744428674442868220777Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeCoA-substrate-specific enzyme activase2e-1895.9
NC_009012:3653111:366096036609603661730771Clostridium thermocellum ATCC 27405, complete genomeputative CoA-substrate-specific enzyme activase4e-1894.7
NC_019908:2401577:2401577240157724026471071Brachyspira pilosicoli P43/6/78 chromosome, complete genomeCoA-substrate-specific enzyme activase2e-1792.8
NC_010337:147664:177486177486178340855Heliobacterium modesticaldum Ice1, complete genomeactivator of (r)-2-hydroxyglutaryl-coa dehydratase domain protein2e-1792.4
NC_018515:4442500:444366244436624444450789Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeCoA-substrate-specific enzyme activase9e-1687
NC_021182:4088000:411070941107094111602894Clostridium pasteurianum BC1, complete genomehypothetical protein2e-1586.3
NC_009943:1043210:104658810465881047358771Candidatus Desulfococcus oleovorans Hxd3, complete genomeputative CoA-substrate-specific enzyme activase7e-1584.3
NC_007681:1157402:1173252117325211745051254Methanosphaera stadtmanae DSM 3091, complete genomepredicted activator of 2-hydroxyglutaryl-CoA dehydratase2e-1482.4
NC_016627:3815690:383284638328463833625780Clostridium clariflavum DSM 19732 chromosome, complete genomeCoA-substrate-specific enzyme activase, putative9e-1480.5
NC_013887:90929:115352115352116029678Methanocaldococcus sp. FS406-22 chromosome, complete genomeCoA-substrate-specific enzyme activase4e-1378.2
NC_010516:3466000:346909534690953469988894Clostridium botulinum B1 str. Okra, complete genomehypothetical protein4e-1378.2
NC_010516:3466000:3469991346999134710881098Clostridium botulinum B1 str. Okra, complete genomeputative R-2-hydroxyglutaryl-CoA dehydratase subunit6e-1067.8
NC_009698:3275839:3274761327476132758581098Clostridium botulinum A str. Hall chromosome, complete genomeR-2-hydroxyglutaryl-CoA dehydratase subunit2e-0966.2
NC_014377:1227850:1230332123033212314411110Thermosediminibacter oceani DSM 16646 chromosome, complete genomehypothetical protein2e-0759.3
NC_015425:2528549:2565637256563725667131077Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein3e-0655.5