Pre_GI: BLASTP Hits

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Query: NC_013410:3105121:3121266 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3121266, End: 3122075, Length: 810

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013199:1407742:1413493141349314149351443Lactobacillus rhamnosus Lc 705, complete genomeperiplasmic carboxyl-terminal protease2e-0859.7
NC_018515:4474000:4484324448432444860211698Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeC-terminal processing peptidase4e-0858.5
NC_009253:3317533:3335746333574633368971152Desulfotomaculum reducens MI-1 chromosome, complete genomecarboxyl-terminal protease2e-0756.2
NC_017059:31564:6334063340649171578Rhodospirillum photometricum DSM 122, complete genomeC-terminal processing peptidase1e-0653.5
NC_003911:4001094:4026640402664040279711332Silicibacter pomeroyi DSS-3, complete genomecarboxyl-terminal protease family protein2e-0653.1
NC_014152:2849991:2851316285131628524641149Thermincola sp. JR, complete genomecarboxyl-terminal protease3e-0652.8
NC_014935:1511835:1514696151469615160511356Nitratifractor saLSUginis DSM 16511 chromosome, complete genomecarboxyl-terminal protease3e-0652.8
NC_015172:2628128:2628128262812826298101683Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomecarboxyl-terminal protease4e-0652
NC_015856:3059737:3062408306240830639521545Collimonas fungivorans Ter331 chromosome, complete genomepeptidase S416e-0651.6
NC_003047:3419212:3447956344795634492781323Sinorhizobium meliloti 1021, complete genomePUTATIVE CARBOXY-TERMINAL PROCESSING PROTEASE PRECURSOR SIGNAL PEPTIDE PROTEIN6e-0651.6
NC_009925:4997000:5014387501438750156791293Acaryochloris marina MBIC11017, complete genomecarboxyl--terminal protease8e-0651.2