Pre_GI: BLASTP Hits

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Query: NC_013410:2586500:2586546 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2586546, End: 2589020, Length: 2475

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008095:7211395:7228546722854672310502505Myxococcus xanthus DK 1622, complete genomeglycogen phosphorylase0894
NC_015711:4033975:4035690403569040381942505Myxococcus fulvus HW-1 chromosome, complete genomeglycogen phosphorylase0889
NC_014623:7963238:7963238796323879657782541Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeglycogen phosphorylase0881
NC_017030:7967192:7982975798297579854822508Corallococcus coralloides DSM 2259 chromosome, complete genomeglycogen phosphorylase0874
NC_014836:223013:2230132230132255292517Desulfurispirillum indicum S5 chromosome, complete genomeglycogen/starch/alpha-glucan phosphorylase0825
NC_019940:2098902:2113120211312021156122493Thioflavicoccus mobilis 8321 chromosome, complete genomeglycogen/starch/alpha-glucan phosphorylase0808
NC_015436:270820:2708202708202733572538Spirochaeta coccoides DSM 17374 chromosome, complete genomeglycogen phosphorylase0791
NC_010658:3622610:3622610362261036250572448Shigella boydii CDC 3083-94, complete genomeglycogen phosphorylase0789
NC_004431:3986472:4000119400011940025662448Escherichia coli CFT073, complete genomeGlycogen phosphorylase0789
NC_007946:3811082:3826296382629638287432448Escherichia coli UTI89, complete genomeglycogen phosphorylase0789
NC_008563:3843859:3859080385908038615272448Escherichia coli APEC O1, complete genomeglycogen phosphorylase GlgP0789
NC_008253:3666387:3680033368003336824802448Escherichia coli 536, complete genomeglycogen phosphorylase0789
NC_011742:3758618:3773831377383137762782448Escherichia coli S88 chromosome, complete genomeglycogen phosphorylase0789
NC_011745:3992434:4007172400717240096192448Escherichia coli ED1a chromosome, complete genomeglycogen phosphorylase0789
NC_015968:4389871:4405792440579244082392448Enterobacter asburiae LF7a chromosome, complete genomeglycogen/starch/alpha-glucan phosphorylase0788
NC_011740:3453455:3469713346971334721602448Escherichia fergusonii ATCC 35469, complete genomeglycogen phosphorylase0786
NC_011751:3984236:3997672399767240001192448Escherichia coli UMN026 chromosome, complete genomeglycogen phosphorylase0786
NC_012779:3570720:3570720357072035731702451Edwardsiella ictaluri 93-146, complete genomeglycogen phosphorylase0784
NC_012691:1144715:1147011114701111494792469Tolumonas auensis DSM 9187, complete genomeglycogen/starch/alpha-glucan phosphorylase0773
NC_007516:124486:1532551532551557772523Synechococcus sp. CC9605, complete genomeGlycogen/starch/alpha-glucan phosphorylase0768
NC_012214:3750649:3764867376486737673142448Erwinia pyrifoliae Ep1/96, complete genomeGlycogen phosphorylase0765
NC_008817:1574506:1574506157450615770702565Prochlorococcus marinus str. MIT 9515, complete genomephosphorylase0763
NC_008820:2268900:2289912228991222924372526Prochlorococcus marinus str. MIT 9303, complete genomephosphorylase0762
NC_015671:255808:2601452601452626222478Cellvibrio gilvus ATCC 13127 chromosome, complete genomeglycogen/starch/alpha-glucan phosphorylase0762
NC_009091:1514770:1514770151477015173162547Prochlorococcus marinus str. MIT 9301, complete genomephosphorylase0760
NC_011567:388358:4143844143844167802397Anoxybacillus flavithermus WK1, complete genomeGlucan phosphorylase0740
NC_004193:375416:4381234381234405552433Oceanobacillus iheyensis HTE831, complete genomeglycogen phosphorylase0733
NC_020291:6216000:6242389624238962448242436Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeglycogen phosphorylase GlgP0721
NC_021182:2422226:2422226242222624246552430Clostridium pasteurianum BC1, complete genomeglycogen/starch/alpha-glucan phosphorylase0720
NC_011969:4556296:4576911457691145793192409Bacillus cereus Q1 chromosome, complete genomeglycogen phosphorylase0716
NC_016779:4588000:4608661460866146110692409Bacillus cereus F837/76 chromosome, complete genomeGlycogen phosphorylase0716
NC_021171:2562000:2582512258251225849052394Bacillus sp. 1NLA3E, complete genomeglycogen phosphorylase0714
NC_011658:4616933:4635488463548846378962409Bacillus cereus AH187 chromosome, complete genomeglycogen phosphorylase0714
NC_011725:4799905:4819737481973748221452409Bacillus cereus B4264 chromosome, complete genomeglycogen phosphorylase0714
NC_010674:3581044:3598808359880836012492442Clostridium botulinum B str. Eklund 17B, complete genomeglycogen phosphorylase0713
NC_010723:3395187:3412892341289234153332442Clostridium botulinum E3 str. Alaska E43, complete genomeglycogen phosphorylase0713
NC_004722:4767294:4786565478656547889732409Bacillus cereus ATCC 14579, complete genomeGlycogen phosphorylase0712
NC_014171:4681822:4702180470218047045882409Bacillus thuringiensis BMB171 chromosome, complete genomeglycogen phosphorylase0712
NC_014976:1174430:1172047117204711744432397Bacillus subtilis BSn5 chromosome, complete genomeglycogen phosphorylase0709
NC_014632:1514500:1529600152960015319812382Ilyobacter polytropus DSM 2926 chromosome, complete genomemaltodextrin phosphorylase0704
NC_003366:64908:8401084010864452436Clostridium perfringens str. 13, complete genomeglycogen phosphorylase0696
NC_016894:377446:3967553967553991812427Acetobacterium woodii DSM 1030 chromosome, complete genomeglycogen phosphorylase GlgP10672
NC_012214:3750649:3750649375064937530512403Erwinia pyrifoliae Ep1/96, complete genomeMaltodextrin phosphorylase0671
NC_017317:1598925:1620838162083816232462409Corynebacterium ulcerans 809 chromosome, complete genomeglycogen phosphorylase4e-173608
NC_013192:1993718:2010831201083120130952265Leptotrichia buccalis DSM 1135, complete genomeglycogen/starch/alpha-glucan phosphorylase2e-137489
NC_012778:1778654:1780291178029117825852295Eubacterium eligens ATCC 27750, complete genomestarch phosphorylase2e-136487
NC_007297:1001981:1022907102290710251712265Streptococcus pyogenes MGAS5005, complete genomeglycogen phosphorylase2e-133477
NC_015696:1853979:1856231185623118584982268Francisella sp. TX077308 chromosome, complete genomeglycogen phosphorylase3e-131469
NC_011979:589874:6029676029676055312565Geobacter sp. FRC-32, complete genomealpha-glucan phosphorylase7e-1893.2
NC_015474:72103:8576285762882722511Pyrococcus sp. NA2 chromosome, complete genomeAlpha-glucan phosphorylase2e-1482
NC_014215:1190447:1200410120041012029802571Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Alpha-glucan phosphorylase6e-1273.6
NC_012214:3750649:375952037595203759678159Erwinia pyrifoliae Ep1/96, complete genomeGlycogen phosphorylase, fragment1e-1172.4
NC_012214:3750649:376117337611733761331159Erwinia pyrifoliae Ep1/96, complete genomeGlycogen phosphorylase, fragment1e-1172.4
NC_014973:4630132:4664027466402746665732547Geobacter sp. M18 chromosome, complete genomealpha-glucan phosphorylase1e-1172.4
NC_014150:1099507:1115180111518011177412562Brachyspira murdochii DSM 12563 chromosome, complete genomealpha-glucan phosphorylase2e-1068.6
NC_013943:1381000:1398276139827614008252550Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomealpha-glucan phosphorylase1e-0862.4
NC_010003:2056000:2064312206431220668792568Petrotoga mobilis SJ95, complete genomealpha-glucan phosphorylase3e-0861.2
NC_010125:148500:1653941653941671031710Gluconacetobacter diazotrophicus PAl 5, complete genome4e-0860.8
NC_015846:445000:4629994629994672374239Capnocytophaga canimorsus Cc5 chromosome, complete genomeglycogen phosphorylase1e-0759.7
NC_012214:3750649:376323637632363763412177Erwinia pyrifoliae Ep1/96, complete genomeGlycogen phosphorylase, fragment2e-0758.9