Pre_GI: BLASTP Hits

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Query: NC_013410:2179342:2199901 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2199901, End: 2202900, Length: 3000

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011898:1512213:1531759153175915352533495Clostridium cellulolyticum H10, complete genomeCarbohydrate binding family 60648
NC_016791:1079322:1092966109296610964453480Clostridium sp. BNL1100 chromosome, complete genometrehalose/maltose hydrolase or phosphorylase0634
NC_009614:3748950:3773482377348237759412460Bacteroides vulgatus ATCC 8482 chromosome, complete genomeglycoside hydrolase3e-175616
NC_008536:4921224:4931457493145749337362280Solibacter usitatus Ellin6076, complete genomehypothetical protein4e-169596
NC_014817:142976:1556521556521580212370Asticcacaulis excentricus CB 48 chromosome 2, complete sequencealpha-l-fucosidase3e-168593
NC_014655:2533929:2544272254427225466892418Leadbetterella byssophila DSM 17132 chromosome, complete genomealpha-l-fucosidase1e-164581
NC_014041:1084246:1087039108703910894982460Zunongwangia profunda SM-A87 chromosome, complete genomesix-hairpin glycosidase1e-151537
NC_016935:4233223:4259468425946842618882421Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-151536
NC_015690:4469775:4505065450506545074852421Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein2e-151536
NC_020054:2066510:2083813208381320864372625Fibrella aestuarina BUZ 2 drat genomeAlpha-L-fucosidase8e-151535
NC_011658:2978000:2980173298017329837543582Bacillus cereus AH187 chromosome, complete genomealpha-fucosidase8e-150531
NC_016771:2933886:2936050293605029396313582Bacillus cereus NC7401, complete genomehypothetical protein8e-150531
NC_003366:2143173:2145801214580121502404440Clostridium perfringens str. 13, complete genomehypothetical protein4e-144513
NC_015949:1957185:1957185195718519594432259Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomealpha-L-fucosidase5e-140499
NC_006347:5094763:5110350511035051128392490Bacteroides fragilis YCH46, complete genomehypothetical protein8e-139495
NC_003228:5027668:5043254504325450457432490Bacteroides fragilis NCTC 9343, complete genomehypothetical protein8e-139495
NC_016776:5114211:5129791512979151322802490Bacteroides fragilis 638R, complete genomehypothetical protein8e-139495
NC_015588:2468207:2492183249218324948222640Isoptericola variabilis 225 chromosome, complete genomeAlpha-L-fucosidase6e-93343
NC_007333:1743890:1869321186932118715822262Thermobifida fusca YX, complete genomehypothetical protein2e-29131
NC_003228:1045207:1052070105207010543372268Bacteroides fragilis NCTC 9343, complete genomehypothetical protein8e-22106
NC_013037:5442131:5443929544392954481044176Dyadobacter fermentans DSM 18053, complete genomeCarbohydrate binding family 61e-1172.4
NC_013132:6385223:6388702638870263921003399Chitinophaga pinensis DSM 2588, complete genomeCarbohydrate binding family 67e-1170.5
NC_011898:1512213:1526092152609215291393048Clostridium cellulolyticum H10, complete genomeCarbohydrate binding family 67e-1067
NC_016791:1079322:1085510108551010873211812Clostridium sp. BNL1100 chromosome, complete genomealpha-galactosidase1e-0965.9
NC_011832:913994:9326839326839352202538Candidatus Methanosphaerula palustris E1-9c, complete genomeCarbohydrate binding family 62e-0965.5
NC_007912:3828980:3828980382898038324833504Saccharophagus degradans 2-40, complete genomehypothetical protein2e-0965.5
NC_011898:1512213:1520816152081615226301815Clostridium cellulolyticum H10, complete genomeCarbohydrate binding family 62e-0862.4
NC_010995:323562:3550283550283563861359Cellvibrio japonicus Ueda107, complete genomecarbohydrate binding protein, putative, cbp6B2e-0862
NC_016791:1079322:1087384108738410904313048Clostridium sp. BNL1100 chromosome, complete genomebeta-galactosidase/beta-glucuronidase2e-0862
NC_015844:1188360:1207535120753512089831449Zobellia galactanivorans, complete genomeendo-1,3-beta-glucanase2e-0862
NC_014829:4511738:4511738451173845152833546Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeCarbohydrate binding family 65e-0860.8
NC_013410:2179342:2179342217934221814202079Fibrobacter succinogenes subsp. succinogenes S85 chromosome,glycoside hydrolase family protein1e-0759.7
NC_014623:3462500:3475669347566934786052937Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein3e-0758.2
NC_011898:1512213:1522660152266015260283369Clostridium cellulolyticum H10, complete genomeCarbohydrate binding family 67e-0757
NC_011898:1512213:1512213151221315144532241Clostridium cellulolyticum H10, complete genomeCarbohydrate binding family 69e-0756.6
NC_011898:1512213:1516222151622215177511530Clostridium cellulolyticum H10, complete genomeCarbohydrate binding family 61e-0656.2
NC_016791:1079322:1090492109049210928222331Clostridium sp. BNL1100 chromosome, complete genomeputative glycosylase2e-0655.8
NC_011898:1512213:1535348153534815372371890Clostridium cellulolyticum H10, complete genomeCarbohydrate binding family 62e-0655.8
NC_011898:1512213:1514537151453715161471611Clostridium cellulolyticum H10, complete genomeCarbohydrate binding family 61e-0655.8
NC_016791:1079322:1079322107932210809411620Clostridium sp. BNL1100 chromosome, complete genomeputative glycosylase3e-0655.1
NC_010995:3945339:3952859395285939554892631Cellvibrio japonicus Ueda107, complete genomeglucan exo-1,3-beta glucosidase, putative, glu5A3e-0654.7
NC_011898:1512213:1529200152920015315422343Clostridium cellulolyticum H10, complete genomeCarbohydrate binding family 64e-0654.7
NC_016582:10159486:1018645710186457101878421386Streptomyces bingchenggensis BCW-1 chromosome, complete genomeglycoside hydrolase family protein9e-0653.5