Pre_GI: BLASTP Hits

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Query: NC_013410:2037840:2037840 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2037840, End: 2040977, Length: 3138

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015577:1289975:1289975128997512924342460Treponema azotonutricium ZAS-9 chromosome, complete genomeglycosyltransferase, involved in cell wall biogenesis1e-114414
NC_007604:2213659:2234141223414122363542214Synechococcus elongatus PCC 7942, complete genomeCellulose synthase (UDP-forming)2e-68261
NC_006576:2073163:2080676208067620828892214Synechococcus elongatus PCC 6301, complete genomeUDP-glucose-beta-D-glucan glucosyltransferase3e-68261
NC_020410:1856376:1861790186179018632891500Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeendo-1,4-beta-glucanase2e-62241
NC_019842:1919866:1924981192498119264801500Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,protein BglC7e-62239
NC_015732:2735753:2749419274941927504471029Spirochaeta caldaria DSM 7334 chromosome, complete genomeCellulase4e-59230
NC_016631:2583762:2598130259813026024974368Granulicella mallensis MP5ACTX8 chromosome, complete genomecellulose synthase catalytic subunit2e-58228
NC_015723:1448000:1471166147116614733612196Cupriavidus necator N-1 chromosome 2, complete sequencecellulose synthase catalytic subunit1e-57225
NC_020064:79422:1226381226381252412604Serratia marcescens FGI94, complete genomecellulose synthase catalytic subunit (UDP-forming)3e-57224
NC_011740:1189455:1200643120064312027482106Escherichia fergusonii ATCC 35469, complete genomecellulose synthase catalytic subunit [UDP-forming]3e-57224
NC_016027:3038943:3057454305745430620194566Gluconacetobacter xylinus NBRC 3288, complete genomecellulose synthase catalytic subunit5e-55216
NC_007604:1442500:1447847144784714500692223Synechococcus elongatus PCC 7942, complete genomeCellulose synthase (UDP-forming)2e-48195
NC_006576:161112:1707301707301729522223Synechococcus elongatus PCC 6301, complete genomeUDP-glucose-beta-D-glucan glucosyltransferase2e-48195
NC_010172:1522707:1520215152021515227102496Methylobacterium extorquens PA1, complete genomecellulose synthase catalytic subunit (UDP-forming)4e-46187
NC_011757:1627698:1625197162519716277012505Methylobacterium chloromethanicum CM4, complete genomecellulose synthase catalytic subunit (UDP-forming)8e-46186
NC_012808:1220378:1217877121787712203812505Methylobacterium extorquens AM1, complete genomeCellulose synthase (UDP-forming)9e-46186
NC_012988:1540587:1563855156385515658732019Methylobacterium extorquens DM4, complete genomecellulose synthase catalytic subunit4e-45184
NC_012808:921985:9308259308259327651941Methylobacterium extorquens AM1, complete genomeputative Cellulose synthase catalytic subunit (UDP-forming)4e-45184
NC_010172:1222150:1238255123825512402732019Methylobacterium extorquens PA1, complete genomeCellulose synthase (UDP-forming)6e-45183
NC_011757:5102732:5102732510273251051462415Methylobacterium chloromethanicum CM4, complete genomecellulose synthase catalytic subunit (UDP-forming)2e-44182
NC_011757:1246000:1265355126535512673732019Methylobacterium chloromethanicum CM4, complete genomeCellulose synthase (UDP-forming)2e-44181
NC_007912:4125970:4125970412597041278621893Saccharophagus degradans 2-40, complete genomeCellulase5e-44180
NC_010505:400950:4095264095264115111986Methylobacterium radiotolerans JCM 2831, complete genomeCellulose synthase (UDP-forming)5e-44180
NC_005070:617448:6389186389186409302013Synechococcus sp. WH 8102, complete genomePutative glycosyltransferase2e-42175
NC_007912:4125970:4130713413071341326291917Saccharophagus degradans 2-40, complete genomeCellulase4e-42174
NC_012912:1701231:1747386174738617486661281Dickeya zeae Ech1591, complete genomeCellulase4e-41171
NC_011894:3820000:3847111384711138495432433Methylobacterium nodulans ORS 2060, complete genomecellulose synthase catalytic subunit (UDP-forming)3e-41171
NC_013592:1668092:1687529168752916888091281Dickeya dadantii Ech586, complete genomeCellulase6e-41170
NC_014500:3097362:3098146309814630994261281Dickeya dadantii 3937 chromosome, complete genomeendo-1,4-beta-glucanase2e-39164
NC_009482:485238:5051615051615071071947Synechococcus sp. RCC307 chromosome, complete genomeglycosyl transferase family protein3e-34147
NC_007912:3828980:3828980382898038324833504Saccharophagus degradans 2-40, complete genomehypothetical protein1e-32142
NC_008319:1306482:1346382134638213483852004Synechococcus sp. CC9311, complete genomeglycosyl transferase, group 2 family protein domain protein1e-31139
NC_014844:3469848:3491225349122534928771653Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomefamily 2 glycosyl transferase2e-28128
NC_010475:2188827:2200618220061822029842367Synechococcus sp. PCC 7002, complete genomecellulose synthase catalytic subunit1e-26122
NC_016906:1268606:1266735126673512686091875Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative cellulose synthase (UDP-forming), glycosyl transferase family 21e-25119
NC_019745:3217552:322482632248263225824999Gloeocapsa sp. PCC 7428, complete genomeglycoside hydrolase family 53e-21105
NC_014972:3000138:3008285300828530109002616Desulfobulbus propionicus DSM 2032 chromosome, complete genomefamily 2 glycosyl transferase6e-21103
NC_014618:2705769:2722106272210627239381833Enterobacter cloacae SCF1 chromosome, complete genomeCellulose synthase (UDP-forming)3e-1998.2
NC_004463:5110709:5110709511070951133782670Bradyrhizobium japonicum USDA 110, complete genomebeta-(1-3)-glucosyl transferase2e-1792.4
NC_020054:2801371:2801371280137128038752505Fibrella aestuarina BUZ 2 drat genomecellulose synthase (UDP-forming)6e-1790.5
NC_012731:2261787:2287125228712522889421818Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein4e-1687.8
NC_020541:3315068:3333518333351833361392622Rhodanobacter sp. 2APBS1, complete genomeexo-beta-1,3-glucanase1e-1585.9
NC_019942:1211535:1217523121752312194901968Aciduliprofundum sp. MAR08-339, complete genomeglycosyl transferase1e-1483.2
NC_016582:9911497:9911497991149799133321836Streptomyces bingchenggensis BCW-1 chromosome, complete genomeglycosyl transferase family protein2e-1378.6
NC_002516:1236644:1260557126055712631662610Pseudomonas aeruginosa PAO1, complete genomeprobable glucosyl transferase2e-1275.5
NC_013929:6371019:6379686637968663816831998Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-1275.1
NC_009089:1202261:1202261120226112035171257Clostridium difficile 630, complete genomeputative glycosyl transferase2e-1172.4
NC_010602:2911823:2932700293270029342411542Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'glycosyltransferase5e-1170.9
NC_010842:2919108:2941086294108629426271542Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeGlycosyltransferase plus another conserved domain5e-1170.9
NC_013891:353625:3692133692133705201308Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeglycosyl transferase, family 2 protein1e-0759.3
NC_010571:1334000:1349433134943313511331701Opitutus terrae PB90-1, complete genomeglycoside hydrolase family 52e-0759.3
NC_020450:875757:8757578757578770851329Lactococcus lactis subsp. lactis IO-1 DNA, complete genomeglycosyl transferase8e-0757