Some Help

Query: NC_013410:1591500:1621641 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1621641, End: 1622657, Length: 1017

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017075:3165858:3185220318522031862961077Rubrivivax gelatinosus IL144, complete genometranscriptional regulator, Xre family3e-1066.6
NC_018678:87064:8898188981900721092Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein4e-0962.4
NC_009655:1357486:1367284136728413682971014Actinobacillus succinogenes 130Z chromosome, complete genomeXRE family plasmid maintenance system antidote protein4e-0859.3
NC_011138:3881446:3901794390179439029091116Alteromonas macleodii 'Deep ecotype', complete genomePlasmid maintenance system antidote protein3e-0756.6
NC_012778:229503:2377682377682388201053Eubacterium eligens ATCC 27750, complete genomehypothetical protein3e-0756.2
NC_014011:1354261:1358334135833413594551122Aminobacterium colombiense DSM 12261 chromosome, complete genomeplasmid maintenance system antidote protein, XRE family7e-0652