Pre_GI: BLASTP Hits

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Query: NC_013410:1591500:1613805 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1613805, End: 1614452, Length: 648

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014364:394899:422207422207422860654Spirochaeta smaragdinae DSM 11293 chromosome, complete genomehypothetical protein5e-55214
NC_003902:396000:403138403138404073936Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein2e-49195
NC_007086:396723:403723403723404658936Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein2e-49195
NC_009253:3272000:328810732881073288766660Desulfotomaculum reducens MI-1 chromosome, complete genomehypothetical protein1e-44179