Pre_GI: BLASTP Hits

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Query: NC_013410:1591500:1603252 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1603252, End: 1605765, Length: 2514

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006350:595893:6440906440906461622073Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein4e-0757.8
NC_014500:564864:5885285885285905702043Dickeya dadantii 3937 chromosome, complete genomephage abortive infection protein3e-0758.2
NC_015968:74124:8289082890848451956Enterobacter asburiae LF7a chromosome, complete genomeputative DNA-binding protein2e-0758.2
NC_008609:1027838:1047545104754510531575613Pelobacter propionicus DSM 2379, complete genomehypothetical protein2e-53211
NC_017098:1149145:1170484117048411726102127Spirochaeta africana DSM 8902 chromosome, complete genomereverse transcriptase5e-0653.9
NC_013889:1740858:1750200175020017514231224Thioalkalivibrio sp. K90mix chromosome, complete genome4e-0757.4
NC_016602:2854107:2863424286342428654632040Vibrio furnissii NCTC 11218 chromosome 1, complete sequencephage-related hypothetical protein8e-0653.1
NC_003919:169510:1777091777091792261518Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein3e-0758.2