Pre_GI: BLASTP Hits

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Query: NC_013410:1591500:1597040 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1597040, End: 1599265, Length: 2226

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013410:2179342:2192562219256221945171956Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein5e-97355
NC_014314:1230687:1241852124185212448963045Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete3e-47191
NC_017986:1885613:1906432190643219084021971Pseudomonas putida ND6 chromosome, complete genomehypothetical protein3e-31137
NC_013235:508585:5189695189695207981830Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function DUF2622e-27125
NC_014033:395000:4204544204544222141761Prevotella ruminicola 23 chromosome, complete genomehypothetical protein5e-26120
NC_009802:352641:365367365367365972606Campylobacter concisus 13826, complete genomehypothetical protein5e-26120
NC_008740:1459747:1482548148254814844731926Marinobacter aquaeolei VT8, complete genomeprotein of unknown function DUF1524 RloF2e-25118
NC_011757:3486283:3495023349502334968881866Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function DUF2623e-25117
NC_007794:262402:2741812741812760761896Novosphingobium aromaticivorans DSM 12444, complete genomeprotein of unknown function DUF1524 RloF3e-23110
NC_013441:382597:4003494003494027062358Gordonia bronchialis DSM 43247, complete genomeprotein of unknown function DUF2624e-23110
NC_009253:529494:5481725481725501421971Desulfotomaculum reducens MI-1 chromosome, complete genomehypothetical protein8e-22106
NC_008699:1132790:1164146116414611663262181Nocardioides sp. JS614, complete genomeprotein of unknown function DUF1524 RloF8e-21102
NC_014253:1163783:1184823118482311868322010Methanohalobium evestigatum Z-7303 chromosome, complete genomehypothetical protein7e-2099.8
NC_007946:2894793:2903828290382829057171890Escherichia coli UTI89, complete genomehypothetical protein3e-1997.4
NC_011742:2823000:2836105283610528380541950Escherichia coli S88 chromosome, complete genomehypothetical protein4e-1997.1
NC_008563:2909945:2918794291879429206081815Escherichia coli APEC O1, complete genomehypothetical protein5e-1996.7
NC_015379:908904:9491509491509509581809Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein7e-1996.3
NC_011832:1399446:1411651141165114134531803Candidatus Methanosphaerula palustris E1-9c, complete genomeprotein of unknown function DUF2629e-1892.8
NC_015577:1392390:1404933140493314069842052Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein2e-1791.7
NC_014256:683384:7059237059237079862064Helicobacter pylori B8 chromosome, complete genomehypothetical protein2e-1688.2
NC_006958:748500:7598347598347622692436Corynebacterium glutamicum ATCC 13032, complete genomehypothetical protein4e-1687
NC_003450:747000:7583617583617607962436Corynebacterium glutamicum ATCC 13032, complete genomehypothetical protein4e-1687
NC_014391:3445672:3455832345583234583692538Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein1e-1585.9
NC_013595:8603188:8615007861500786175352529Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-1585.1
NC_009655:866281:8791778791778808951719Actinobacillus succinogenes 130Z chromosome, complete genomehypothetical protein9e-1582.8
NC_013209:2032500:2039832203983220416731842Acetobacter pasteurianus IFO 3283-01, complete genomehypothetical protein9e-1582.8
NC_017100:2035000:2042472204247220443131842Acetobacter pasteurianus IFO 3283-03, complete genomehypothetical protein9e-1582.8
NC_017108:2032500:2039809203980920416501842Acetobacter pasteurianus IFO 3283-12, complete genomehypothetical protein9e-1582.8
NC_017111:2032500:2039827203982720416681842Acetobacter pasteurianus IFO 3283-32, complete genomehypothetical protein9e-1582.8
NC_017121:2032500:2039814203981420416551842Acetobacter pasteurianus IFO 3283-07, complete genomehypothetical protein9e-1582.8
NC_017125:2035000:2042452204245220442931842Acetobacter pasteurianus IFO 3283-22, complete genomehypothetical protein9e-1582.8
NC_017146:2035000:2042494204249420443351842Acetobacter pasteurianus IFO 3283-26, complete genomehypothetical protein9e-1582.8
NC_017150:1940000:1947578194757819494191842Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein9e-1582.8
NC_017278:258921:2731782731782750551878Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein2e-1482
NC_012778:1573847:1580679158067915832132535Eubacterium eligens ATCC 27750, complete genomehypothetical protein4e-1480.9
NC_010468:4059436:4072713407271340748062094Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF2628e-1479.7
NC_013062:1141865:1156597115659711591042508Flavobacteriaceae bacterium 3519-10, complete genomeProtein of unknown function DUF262/DUF1524 RloF2e-1378.2
NC_008529:1042220:1059981105998110624942514Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completehypothetical protein4e-1377.4
NC_017063:775337:7943957943957965452151Helicobacter pylori ELS37 chromosome, complete genomehypothetical protein7e-1376.6
NC_012988:2455807:2468245246824524700051761Methylobacterium extorquens DM4, complete genomehypothetical protein7e-1376.3
NC_004557:691944:7094797094797115542076Clostridium tetani E88, complete genomehypothetical protein1e-1275.9
NC_013757:3651646:3680152368015236818101659Geodermatophilus obscurus DSM 43160, complete genomeprotein of unknown function DUF2629e-1375.9
NC_010831:1224000:1238801123880112408642064Chlorobium phaeobacteroides BS1, complete genomeprotein of unknown function DUF2621e-1275.5
NC_011958:976500:9924279924279944842058Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein2e-1274.7
NC_012489:4336790:4376232437623243778931662Gemmatimonas aurantiaca T-27, complete genomehypothetical protein3e-1274.7
NC_009972:606393:6336616336616353671707Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomehypothetical protein4e-1273.9
NC_007434:3973145:4008333400833340101231791Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein1e-1172.4
NC_009342:589741:5950335950335977742742Corynebacterium glutamicum R chromosome, complete genomehypothetical protein2e-1172
NC_007645:3688000:3693773369377336954671695Hahella chejuensis KCTC 2396, complete genomehypothetical protein2e-1171.6
NC_014659:1731121:1731121173112117338922772Rhodococcus equi 103S, complete genomehypothetical protein2e-1171.6
NC_014614:2643203:2658648265864826603961749Clostridium sticklandii, complete genomehypothetical protein4e-1170.5
NC_008435:1131242:1156790115679011585111722Rhodopseudomonas palustris BisA53, complete genomeprotein of unknown function DUF2621e-1069.3
NC_007958:4371125:4389999438999943917201722Rhodopseudomonas palustris BisB5, complete genomeprotein of unknown function DUF2621e-1069.3
NC_013165:329185:3698533698533719252073Slackia heliotrinireducens DSM 20476, complete genomehypothetical protein1e-1068.9
NC_014210:3671495:3679149367914936808161668Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,protein of unknown function DUF2622e-1068.2
NC_010468:4059436:4066582406658240682341653Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF2622e-1068.2
NC_006361:4597718:4608933460893346106031671Nocardia farcinica IFM 10152, complete genomehypothetical protein5e-1067
NC_011415:1472500:1487436148743614891181683Escherichia coli SE11 chromosome, complete genomehypothetical protein6e-1066.6
NC_014363:1902868:1908007190800719100792073Olsenella uli DSM 7084 chromosome, complete genomeprotein of unknown function DUF2627e-1066.6
NC_006510:3321426:3334788333478833364101623Geobacillus kaustophilus HTA426, complete genomehypothetical protein9e-1066.2
NC_008262:2348328:2349485234948523512391755Clostridium perfringens SM101, complete genomeProtein of unknown function DUF262 family1e-0965.9
NC_016593:3402205:3415269341526934167801512Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein1e-0965.9
NC_020210:3341976:3386732338673233883511620Geobacillus sp. GHH01, complete genomehypothetical protein1e-0965.9
NC_012793:3275751:3277692327769232793111620Geobacillus sp. WCH70, complete genomeprotein of unknown function DUF2622e-0965.1
NC_002162:643446:6534836534836563982916Ureaplasma parvum serovar 3 str. ATCC 700970, complete genomehypothetical protein4e-0963.9
NC_009138:3153576:3164695316469531663381644Herminiimonas arsenicoxydans, complete genomehypothetical protein7e-0963.2
NC_014820:582443:5970535970535987891737Cenarchaeum symbiosum A, complete genomehypothetical protein2e-0862
NC_013510:170199:1894511894511910311581Thermomonospora curvata DSM 43183, complete genomeprotein of unknown function DUF2622e-0861.6
NC_015573:2323268:2336221233622123379151695Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein2e-0861.6
NC_008212:1386834:139606113960611396723663Haloquadratum walsbyi DSM 16790, complete genomehypothetical protein5e-0860.5
NC_007969:2885249:2895675289567528975341860Psychrobacter cryohalolentis K5, complete genomeprotein of unknown function DUF2625e-0860.5
NC_015422:2126614:2146418214641821481361719Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein6e-0860.1
NC_014217:2760898:2784009278400927856881680Starkeya novella DSM 506 chromosome, complete genomeprotein of unknown function DUF2621e-0759.3
NC_010617:2626000:2635004263500426374422439Kocuria rhizophila DC2201, complete genomehypothetical protein1e-0759.3
NC_007164:1434305:1439777143977714413961620Corynebacterium jeikeium K411, complete genomehypothetical protein1e-0758.9
NC_014814:859124:8817248817248835651842Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein1e-0758.9
NC_017379:1035464:1064610106461010663521743Helicobacter pylori Puno135 chromosome, complete genomehypothetical protein1e-0758.9
NC_007575:1663088:1664737166473716661341398Sulfurimonas denitrificans DSM 1251, complete genomehypothetical protein1e-0758.9
NC_013849:337350:3638843638843656901807Ferroglobus placidus DSM 10642 chromosome, complete genomehypothetical protein1e-0758.9
NC_015593:2553500:2582536258253625843201785Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completehypothetical protein2e-0758.5
NC_012973:967380:9886959886959904101716Helicobacter pylori B38 chromosome, complete genomehypothetical protein2e-0758.2
NC_011835:1395716:1407296140729614092451950Bifidobacterium animalis subsp. lactis AD011 chromosome, completetype I restriction-modification system protein2e-0758.2
NC_013522:1538994:1549814154981415516161803Thermanaerovibrio acidaminovorans DSM 6589, complete genomeprotein of unknown function DUF2622e-0758.2
NC_012814:669434:6809966809966829631968Bifidobacterium animalis subsp. lactis Bl-04, complete genometype I restriction-modification system protein2e-0758.2
NC_012815:669436:6809986809986829651968Bifidobacterium animalis subsp. lactis DSM 10140, complete genometype I restriction-modification system protein2e-0758.2
NC_017217:669437:6809996809996829661968Bifidobacterium animalis subsp. lactis V9 chromosome, completetype I restriction-modification system protein2e-0758.2
NC_017214:1304774:1316314131631413183021989Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeType I restriction-modification system DNA methylase2e-0758.2
NC_017215:669358:6808996808996828871989Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Type I restriction-modification system DNA methylase2e-0758.2
NC_017216:669296:6808376808376828251989Bifidobacterium animalis subsp. lactis BLC1, complete genomeputative type I restriction-modification system protein2e-0758.2
NC_015635:3860570:3879545387954538816292085Microlunatus phosphovorus NM-1, complete genomehypothetical protein3e-0757.8
NC_016944:514742:5403235403235421341812Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein3e-0654.3
NC_012590:637651:6573276573276591891863Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein4e-0653.9
NC_017187:814940:8261428261428276171476Arcobacter butzleri ED-1, complete genomehypothetical protein5e-0653.9
NC_015578:2428500:2438038243803824400051968Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein9e-0652.8