Pre_GI: BLASTP Hits

Some Help

Query: NC_013410:1591500:1596244 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1596244, End: 1596723, Length: 480

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017068:1143515:117075411707541171230477Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein2e-58224
NC_015578:3495034:350088935008893501371483Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein1e-38159
NC_015160:1117371:113476611347661135248483Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein6e-2199.8
NC_015578:3914189:392148439214843921963480Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein2e-2098.2
NC_014387:2661496:269236926923692692929561Butyrivibrio proteoclasticus B316 chromosome 1, complete genomehypothetical protein3e-1994
NC_015311:24071:304123041230885474Prevotella denticola F0289 chromosome, complete genomehypothetical protein2e-1478.2
NC_015311:510661:521497521497521976480Prevotella denticola F0289 chromosome, complete genomehypothetical protein3e-1477.8
NC_019968:1194489:120676812067681207280513Prevotella dentalis DSM 3688 chromosome 2, complete sequencehypothetical protein1e-1375.5
NC_015975:558523:575675575675576241567Lactobacillus ruminis ATCC 27782 chromosome, complete genomehypothetical protein3e-1064.3
NC_017068:2661419:266753526675352668005471Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein6e-0856.6
NC_013410:2519441:254142125414212541984564Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein6e-0856.6