Pre_GI: BLASTP Hits

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Query: NC_013410:1591500:1591826 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1591826, End: 1592881, Length: 1056

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016584:1998000:2043074204307420440751002Desulfosporosinus orientis DSM 765 chromosome, complete genomevirulence protein3e-119428
NC_016803:2431672:2451990245199024530151026Desulfovibrio desulfuricans ND132 chromosome, complete genomehypothetical protein2e-104379
NC_008786:3323167:335994333599433360938996Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein4e-90331
NC_002978:234082:2458292458292468331005Wolbachia endosymbiont of Drosophila melanogaster, complete genomehypothetical protein7e-87320
NC_012416:573202:6011066011066021101005Wolbachia sp. wRi, complete genomehypothetical protein2e-86319
NC_012416:1079661:1107565110756511085691005Wolbachia sp. wRi, complete genomehypothetical protein2e-86319
NC_013943:2705983:2713815271381527148551041Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomehypothetical protein3e-85315
NC_009051:1455183:1486718148671814877941077Methanoculleus marisnigri JR1, complete genomehypothetical protein8e-83307
NC_012778:1573847:1579564157956415806071044Eubacterium eligens ATCC 27750, complete genomehypothetical protein1e-81303
NC_018866:2484500:249252724925272493420894Dehalobacter sp. DCA chromosome, complete genomePutative DNA-binding protein in cluster with Type I restriction-modification system3e-81302
NC_010831:788500:7911527911527922041053Chlorobium phaeobacteroides BS1, complete genomehypothetical protein4e-81301
NC_006270:4149004:4167710416771041687141005Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-78293
NC_016609:8772011:878213587821358783121987Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein7e-78290
NC_013790:123281:140711140711141559849Methanobrevibacter ruminantium M1 chromosome, complete genomehypothetical protein2e-77289
NC_015321:4287945:4309308430930843103331026Fluviicola taffensis DSM 16823 chromosome, complete genomehypothetical protein2e-77289
NC_014246:1457992:148411314841131485069957Mobiluncus curtisii ATCC 43063 chromosome, complete genomeDNA-binding protein5e-76284
NC_015160:2145915:2164318216431821653401023Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein8e-75280
NC_016629:3789554:3807920380792038089751056Desulfovibrio africanus str. Walvis Bay chromosome, completevirulence protein-like protein3e-74279
NC_013410:2586500:259017725901772591175999Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein4e-74278
NC_006322:4149500:416782541678254168742918Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-73276
NC_011060:1288862:1302471130247113035321062Pelodictyon phaeoclathratiforme BU-1, complete genomehypothetical protein3e-72272
NC_008942:875060:8795138795138805921080Methanocorpusculum labreanum Z, complete genomehypothetical protein3e-72272
NC_014507:1127115:1142721114272111437851065Methanoplanus petrolearius DSM 11571 chromosome, complete genomehypothetical protein2e-72272
NC_010995:764567:7739767739767750341059Cellvibrio japonicus Ueda107, complete genomeRhuM-like protein3e-71268
NC_003902:555699:5663915663915674011011Xanthomonas campestris pv. campestris str. ATCC 33913, completeDNA-binding protein7e-71267
NC_007086:557789:5684815684815694911011Xanthomonas campestris pv. campestris str. 8004, complete genomeDNA-binding protein7e-71267
NC_015278:176508:184693184693185685993Aerococcus urinae ACS-120-V-Col10a chromosome, complete genomehypothetical protein1e-70267
NC_015731:1:1292212922139591038Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein2e-70266
NC_007508:570000:5791265791265801361011Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative DNA-binding protein7e-70264
NC_016863:3905875:3913032391303239140691038Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein8e-70264
NC_015663:1356982:1380699138069913817361038Enterobacter aerogenes KCTC 2190 chromosome, complete genomeDNA-binding protein5e-69261
NC_016860:3964000:397467439746743975666993Salmonella enterica subsp. enterica serovar Typhimurium strvirulence protein7e-69261
NC_010498:4856011:4865478486547848665121035Escherichia coli SMS-3-5, complete genomehypothetical protein1e-68259
NC_013592:446092:4557244557244567701047Dickeya dadantii Ech586, complete genomehypothetical protein3e-68259
NC_010524:4644587:4671873467187346729731101Leptothrix cholodnii SP-6, complete genomehypothetical protein6e-68258
NC_009714:1329573:135071513507151351542828Campylobacter hominis ATCC BAA-381, complete genome6e-68258
NC_014246:651801:6720626720626731111050Mobiluncus curtisii ATCC 43063 chromosome, complete genomeDNA-binding protein5e-68258
NC_007406:3354000:3374542337454233755701029Nitrobacter winogradskyi Nb-255, complete genomeputative DNA-binding protein2e-67256
NC_007508:1324000:1331921133192113330151095Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein4e-67255
NC_015711:8964410:8995481899548189965361056Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein5e-67254
NC_014217:2760898:2773982277398227750071026Starkeya novella DSM 506 chromosome, complete genomeputative DNA-binding protein9e-67254
NC_014972:247028:2470282470282480861059Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein1e-66253
NC_010688:3740399:3748371374837137494531083Xanthomonas campestris pv. campestris, complete genomehypothetical protein3e-66252
NC_007086:3805390:3814061381406138151431083Xanthomonas campestris pv. campestris str. 8004, complete genomevirulence protein7e-66251
NC_021150:5298500:5306685530668553077581074Azotobacter vinelandii CA6, complete genomecytoplasmic protein2e-65249
NC_012560:5338707:5348793534879353498661074Azotobacter vinelandii DJ, complete genomecytoplasmic protein2e-65249
NC_004663:3827521:3849918384991838509341017Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein3e-65249
NC_009943:272158:2721582721582732191062Candidatus Desulfococcus oleovorans Hxd3, complete genomeconserved hypothetical protein5e-65248
NC_015160:2145915:216327521632752164270996Odoribacter splanchnicus DSM 20712 chromosome, complete genomeputative DNA-binding protein3e-64246
NC_002937:1764117:1782972178297217839851014Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein3e-63242
NC_016832:3858815:3870827387082738718551029Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-63241
NC_014828:501342:5066335066335076671035Ethanoligenens harbinense YUAN-3 chromosome, complete genomehypothetical protein1e-62240
NC_015696:285456:296840296840297826987Francisella sp. TX077308 chromosome, complete genomeputative DNA-binding protein1e-62240
NC_003198:3881221:389654038965403897523984Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative DNA-binding protein3e-62239
NC_014933:510164:5446985446985457261029Bacteroides helcogenes P 36-108 chromosome, complete genomehypothetical protein3e-60232
NC_020156:861402:866495866495867487993Nonlabens dokdonensis DSW-6, complete genomeputative DNA-binding protein2e-59229
NC_017516:1439775:1449132144913214501421011Neisseria meningitidis H44/76 chromosome, complete genomehypothetical protein8e-59227
NC_017512:760000:7706157706157716251011Neisseria meningitidis WUE 2594, complete genomehypothetical protein8e-59227
NC_003112:844000:8539088539088549181011Neisseria meningitidis MC58, complete genomehypothetical protein8e-59227
NC_003116:988000:99980099980010008101011Neisseria meningitidis Z2491, complete genomeDNA-binding protein8e-59227
NC_010278:315941:3228483228483238491002Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein6e-58224
NC_014655:1396672:1404930140493014059371008Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein2e-57222
NC_011420:69843:7982179821808491029Rhodospirillum centenum SW, complete genomeDNA-binding protein, putative2e-56219
NC_011832:1535740:154409015440901544818729Candidatus Methanosphaerula palustris E1-9c, complete genomehypothetical protein1e-55217
NC_006513:1547092:1552842155284215538551014Azoarcus sp. EbN1, complete genomeDNA-binding protein5e-55215
NC_010120:788000:799168799168800088921Neisseria meningitidis 053442, complete genomeDNA-binding protein5e-55215
NC_015500:484984:5020565020565031381083Treponema brennaborense DSM 12168 chromosome, complete genomevirulence protein2e-54213
NC_008786:2729635:2738304273830427393081005Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein4e-54212
NC_015572:4618467:4637972463797246390001029Methylomonas methanica MC09 chromosome, complete genomehypothetical protein6e-53207
NC_010939:321492:327773327773328681909Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeputative DNA-binding protein1e-48193
NC_008150:4634695:463645446364544637017564Yersinia pestis Antiqua, complete genomehypothetical protein1e-41170
NC_017160:4508000:451442545144254514925501Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-38160
NC_008340:1303607:1314633131463313156341002Alkalilimnicola ehrlichei MLHE-1, complete genomeDeath-on-curing protein1e-33144
NC_007969:1664500:1681171168117116821811011Psychrobacter cryohalolentis K5, complete genomeDeath-on-curing protein2e-32139
NC_014365:2810405:282201028220102822468459Desulfarculus baarsii DSM 2075 chromosome, complete genomehypothetical protein4e-29129
NC_002516:3079850:309365830936583094185528Pseudomonas aeruginosa PAO1, complete genomehypothetical protein4e-29129
NC_009663:1656804:166778816677881668648861Sulfurovum sp. NBC37-1, complete genomehypothetical protein7e-29128
NC_013515:1483471:149804714980471498520474Streptobacillus moniliformis DSM 12112, complete genome7e-29128
NC_013410:3787626:380066838006683801576909Fibrobacter succinogenes subsp. succinogenes S85 chromosome,DNA-binding protein4e-26119
NC_003228:401513:417101417101417817717Bacteroides fragilis NCTC 9343, complete genomehypothetical protein5e-26119
NC_016776:449150:468466468466469338873Bacteroides fragilis 638R, complete genomehypothetical protein6e-26118
NC_006347:451216:470545470545471402858Bacteroides fragilis YCH46, complete genomeputative DNA-binding protein6e-26118
NC_013889:1740858:1754992175499217559961005Thioalkalivibrio sp. K90mix chromosome, complete genomedeath-on-curing family protein2e-25116
NC_015696:285456:294149294149295135987Francisella sp. TX077308 chromosome, complete genomeputative DNA-binding protein1e-22107
NC_015311:510661:520188520188521177990Prevotella denticola F0289 chromosome, complete genomephosphoribosylaminoimidazolesuccinocarboxamide synthase2e-22106
NC_015160:2002570:202630220263022027132831Odoribacter splanchnicus DSM 20712 chromosome, complete genomeputative DNA-binding protein1e-21103
NC_012108:1067876:1081573108157310826011029Desulfobacterium autotrophicum HRM2, complete genomepredicted death-on-curing family protein3e-21102
NC_007517:1998342:201351920135192014112594Geobacter metallireducens GS-15, complete genomehypothetical protein6e-21101
NC_014370:885937:9193189193189203491032Prevotella melaninogenica ATCC 25845 chromosome chromosome I,death-on-curing family protein1e-20100
NC_015578:1940097:195389919538991954774876Treponema primitia ZAS-2 chromosome, complete genomeputative DNA-binding protein6e-2098.6
NC_013959:2449315:245510724551072456099993Sideroxydans lithotrophicus ES-1 chromosome, complete genomefilamentation induced by cAMP protein Fic5e-2098.6
NC_015311:2059879:2092124209212420931251002Prevotella denticola F0289 chromosome, complete genomedeath-on-curing family protein1e-1997.4
NC_009523:341347:355485355485356474990Roseiflexus sp. RS-1 chromosome, complete genomedeath-on-curing protein2e-1996.7
NC_014933:510164:571020571020571871852Bacteroides helcogenes P 36-108 chromosome, complete genomeDNA-binding protein4e-1892.4
NC_013223:448343:448343448343448939597Desulfohalobium retbaense DSM 5692, complete genomedeath-on-curing family protein2e-1790.5
NC_014033:3462437:347019434701943471165972Prevotella ruminicola 23 chromosome, complete genomedeath-on-curing family protein1e-1687.8
NC_009663:738846:756647756647757615969Sulfurovum sp. NBC37-1, complete genomedeath-on-curing family protein1e-1687.4
NC_009663:738846:7547577547577558331077Sulfurovum sp. NBC37-1, complete genomedeath-on-curing family protein2e-1686.7
NC_009515:1693321:169672916967291697160432Methanobrevibacter smithii ATCC 35061, complete genomevirulence protein3e-1686.3
NC_014315:1396990:141375814137581414756999Nitrosococcus watsoni C-113 chromosome, complete genomefilamentation induced by cAMP protein Fic5e-1685.5
NC_008601:1560482:157995015799501580906957Francisella tularensis subsp. novicida U112, complete genomeprophage maintenance system killer protein (DOC)5e-1582
NC_013410:1651000:166929616692961669790495Fibrobacter succinogenes subsp. succinogenes S85 chromosome,Virulence protein-like protein1e-1273.9
NC_011769:247202:260446260446260712267Desulfovibrio vulgaris str. 'Miyazaki F', complete genome2e-0963.5
NC_013171:342714:384867384867385184318Anaerococcus prevotii DSM 20548, complete genomeputative cytoplasmic protein7e-0962
NC_008021:1634912:165014816501481650348201Streptococcus pyogenes MGAS9429, complete genomeRhuM1e-0757.8
NC_008022:1698431:171352817135281713728201Streptococcus pyogenes MGAS10270, complete genomeRhuM1e-0757.8
NC_015222:3137167:314307531430753143317243Nitrosomonas sp. AL212 chromosome, complete genome1e-0757.8
NC_002937:1764117:178276017827601782969210Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein2e-0757
NC_008609:1027838:106096410609641061209246Pelobacter propionicus DSM 2379, complete genomehypothetical protein3e-0653.5
NC_018866:2484500:249342724934272493594168Dehalobacter sp. DCA chromosome, complete genomePutative DNA-binding protein in cluster with Type I restriction-modification system7e-0652