Pre_GI: BLASTP Hits

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Query: NC_013410:1491000:1506006 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1506006, End: 1507454, Length: 1449

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:1213357:1234153123415312356041452Clostridium clariflavum DSM 19732 chromosome, complete genomeendoglucanase Y5e-22106
NC_014828:943911:970624970624971613990Ethanoligenens harbinense YUAN-3 chromosome, complete genomeglycoside hydrolase family 83e-20100
NC_012808:1220378:1223218122321812243361119Methylobacterium extorquens AM1, complete genomeputative cellulase, endoglucanase (celC)1e-1068.6
NC_010172:1522707:1525352152535215266111260Methylobacterium extorquens PA1, complete genomeCellulase1e-1068.2
NC_011757:1627698:1630340163034016316291290Methylobacterium chloromethanicum CM4, complete genomeCellulase1e-0965.1
NC_010725:1419272:1421899142189914231641266Methylobacterium populi BJ001, complete genomeCellulase2e-0964.3
NC_011894:3820000:3843183384318338445891407Methylobacterium nodulans ORS 2060, complete genomeglycoside hydrolase family 81e-0861.2
NC_016109:327826:3332493332493352912043Kitasatospora setae KM-6054, complete genomeputative glucanase1e-0758.2