Pre_GI: BLASTP Hits

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Query: NC_013410:1285857:1329614 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1329614, End: 1330459, Length: 846

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009012:1901492:190149219014921902346855Clostridium thermocellum ATCC 27405, complete genomenitrogenase iron protein3e-123441
NC_014632:1514500:152536715253671526206840Ilyobacter polytropus DSM 2926 chromosome, complete genomeMo-nitrogenase iron protein subunit NifH2e-119428
NC_011837:1056888:106932810693281070164837Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-119427
NC_021182:3438601:345314334531433453961819Clostridium pasteurianum BC1, complete genomenitrogenase iron protein4e-119427
NC_021182:1077721:109436110943611095182822Clostridium pasteurianum BC1, complete genomenitrogenase iron protein1e-118426
NC_021182:3438601:345170334517033452524822Clostridium pasteurianum BC1, complete genomenitrogenase iron protein8e-118423
NC_014328:2588994:258899425889942589821828Clostridium ljungdahlii ATCC 49587 chromosome, complete genomenitrogenase iron protein7e-117419
NC_014328:522045:526644526644527462819Clostridium ljungdahlii ATCC 49587 chromosome, complete genomenitrogenase iron protein1e-115416
NC_016627:1452688:145674114567411457562822Clostridium clariflavum DSM 19732 chromosome, complete genomeMo-nitrogenase iron protein subunit NifH3e-115414
NC_011837:3052000:306813730681373068955819Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-115413
NC_017295:279633:283882283882284700819Clostridium acetobutylicum EA 2018 chromosome, complete genomeNitrogenase iron protein (nitrogenase component II) gene nifH1e-114412
NC_003030:279643:283892283892284710819Clostridium acetobutylicum ATCC 824, complete genomeNitrogenase iron protein (nitrogenase component II) gene nifH1e-114412
NC_015687:279641:283890283890284708819Clostridium acetobutylicum DSM 1731 chromosome, complete genomenitrogenase iron protein, nitrogenase component II, nifH1e-114412
NC_015275:521436:552805552805553623819Clostridium lentocellum DSM 5427 chromosome, complete genomenitrogenase iron protein6e-112403
NC_003901:860242:866092866092866913822Methanosarcina mazei Go1, complete genomenitrogenase reductase2e-109395
NC_020389:714178:718602718602719423822Methanosarcina mazei Tuc01, complete genomeNitrogenase (molybdenum-iron) reductase and maturation protein NifH7e-109393
NC_011565:777929:782754782754783578825Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,nitrogenase iron protein NifH3e-108391
NC_009437:2579161:261322226132222614043822Caldicellulosiruptor saccharolyticus DSM 8903, complete genomenitrogenase iron protein1e-107389
NC_011027:1763952:177015317701531770977825Chlorobaculum parvum NCIB 8327, complete genomenitrogenase iron protein2e-107388
NC_003552:4782635:478928147892814790102822Methanosarcina acetivorans C2A, complete genomenitrogenase (iron protein)8e-107386
NC_014216:2860342:286034228603422861169828Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomenitrogenase iron protein6e-106383
NC_015416:525018:539892539892540707816Methanosaeta concilii GP-6 chromosome, complete genomeNitrogenase iron protein 21e-105382
NC_012881:478042:488297488297489124828Desulfovibrio salexigens DSM 2638, complete genomenitrogenase iron protein8e-105380
NC_017161:1012874:103548210354821036321840Hydrogenobacter thermophilus TK-6 chromosome, complete genomenitrogenase iron protein2e-102371
NC_013799:1012884:103549210354921036331840Hydrogenobacter thermophilus TK-6, complete genomenitrogenase iron protein2e-102371
NC_015847:909938:916494916494917321828Methanococcus maripaludis XI chromosome, complete genomenitrogenase reductase7e-102370
NC_005791:837505:844090844090844917828Methanococcus maripaludis S2, complete genomenitrogenase iron protein (nitrogenase component II)7e-102370
NC_009767:5230790:524411752441175244938822Roseiflexus castenholzii DSM 13941, complete genomenitrogenase iron protein5e-102370
NC_009135:620312:632911632911633738828Methanococcus maripaludis C5, complete genomenitrogenase iron protein4e-102370
NC_013959:826868:871214871214872092879Sideroxydans lithotrophicus ES-1 chromosome, complete genomenitrogenase iron protein2e-101368
NC_000916:1417981:142679614267961427695900Methanothermobacter thermautotrophicus str. Delta H, completenitrogenase NifH subunit4e-101367
NC_009975:1682000:169483816948381695665828Methanococcus maripaludis C6, complete genomenitrogenase iron protein8e-101366
NC_009634:53555:636316363164458828Methanococcus vannielii SB chromosome, complete genomenitrogenase reductase3e-100364
NC_011894:4066926:407208240720824072981900Methylobacterium nodulans ORS 2060, complete genomenitrogenase iron protein4e-99361
NC_011296:1636242:164824116482411649065825Thermodesulfovibrio yellowstonii DSM 11347, complete genomenitrogenase iron protein9e-99360
NC_012560:4929683:496022749602274961054828Azotobacter vinelandii DJ, complete genomenitrogenase iron protein2e-98358
NC_021150:4929670:496021449602144961041828Azotobacter vinelandii CA6, complete genomenitrogenase reductase2e-98358
NC_015636:1123053:113701911370191137870852Methanothermococcus okinawensis IH1 chromosome, complete genomeNitrogenase iron protein2e-97355
NC_008278:7409711:742064674206467421641996Frankia alni ACN14a, complete genomeNitrogenase iron protein (Nitrogenase component II) (Nitrogenase Fe protein) (Nitrogenase reductase, Dinitrogenase reductase)1e-96352
NC_017249:8283701:832504183250418325925885Bradyrhizobium japonicum USDA 6, complete genomedinitrogenase reductase protein8e-94343
NC_004463:1898648:192856719285671929451885Bradyrhizobium japonicum USDA 110, complete genomedinitrogenase reductase protein8e-94343
NC_010546:553774:565791565791566774984Cyanothece sp. ATCC 51142 chromosome circular, complete sequencenitrogenase iron protein3e-93341
NC_013887:17160:263522635227209858Methanocaldococcus sp. FS406-22 chromosome, complete genomenitrogenase iron protein2e-92338
NC_013771:684966:694680694680695543864Cyanobacterium UCYN-A, complete genomeMo-nitrogenase iron protein subunit NifH3e-92338
NC_010529:296500:333073333073333954882Cupriavidus taiwanensis plasmid pRALTA, complete sequenceNifH nitrogenase Fe protein (Nitrogenase component II)(dinitrogenase reductase)8e-92336
NC_016641:2815974:282154828215482822414867Paenibacillus terrae HPL-003 chromosome, complete genomenitrogenase iron protein subunit NifH1e-87323
NC_014166:33138:480634806348977915Arcobacter nitrofigilis DSM 7299 chromosome, complete genomenitrogenase iron protein7e-87320
NC_017192:20404:304673046731381915Arcobacter sp. L, complete genomenitrogenase reductase6e-87320
NC_018664:2279687:229227122922712293146876Clostridium acidurici 9a chromosome, complete genomenitrogenase iron protein NifH2e-76285
NC_015562:1189111:121275812127581213624867Methanotorris igneus Kol 5 chromosome, complete genomenitrogenase iron protein3e-73275
NC_009635:1283830:129230412923041293140837Methanococcus aeolicus Nankai-3 chromosome, complete genomenitrogenase reductase-like protein6e-72270
NC_009635:518000:526772526772527644873Methanococcus aeolicus Nankai-3 chromosome, complete genomenitrogenase reductase-like protein1e-69263
NC_015573:2187688:218932221893222190308987Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeNitrogenase iron protein4e-68258
NC_013665:849508:905738905738906589852Methanocella paludicola SANAE, complete genomeputative nitrogenase iron protein8e-68257
NC_007955:1108000:112038211203821121176795Methanococcoides burtonii DSM 6242, complete genomeNitrogenase1e-66253
NC_014002:1408085:141614414161441416941798Methanohalophilus mahii DSM 5219 chromosome, complete genomeMo-nitrogenase iron protein subunit NifH3e-64245
NC_011830:1923158:194184319418431942598756Desulfitobacterium hafniense DCB-2, complete genomeNitrogenase4e-64244
NC_003552:2502689:2521860252186025241272268Methanosarcina acetivorans C2A, complete genomenitrogen fixation protein NifH/NifE4e-62238
NC_014328:2518081:253584425358442536605762Clostridium ljungdahlii ATCC 49587 chromosome, complete genomenitrogenase iron protein9e-61233
NC_011830:1623452:164160116416011642380780Desulfitobacterium hafniense DCB-2, complete genomeNitrogenase4e-60231
NC_014328:2518081:252805225280522528822771Clostridium ljungdahlii ATCC 49587 chromosome, complete genomenitrogenase iron protein1e-59229
NC_008816:518895:522570522570523457888Prochlorococcus marinus str. AS9601, complete genomeProtochlorophyllide reductase iron-sulfur ATP-binding protein9e-39160
NC_007577:503440:507116507116508003888Prochlorococcus marinus str. MIT 9312, complete genomelight-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein9e-39160
NC_008817:539349:542990542990543877888Prochlorococcus marinus str. MIT 9515, complete genomeProtochlorophyllide reductase iron-sulfur ATP-binding protein1e-38160
NC_009840:544816:548498548498549385888Prochlorococcus marinus str. MIT 9215, complete genomeProtochlorophyllide reductase iron-sulfur ATP-binding protein1e-38160
NC_005072:508827:512474512474513361888Prochlorococcus marinus subsp. pastoris str. CCMP1986, completeProtochlorophyllide reductase iron-sulfur ATP-binding protein2e-38159
NC_005042:513931:517788517788518678891Prochlorococcus marinus subsp. marinus str. CCMP1375, completeChlL4e-38158
NC_009091:493302:496978496978497865888Prochlorococcus marinus str. MIT 9301, complete genomeProtochlorophyllide reductase iron-sulfur ATP-binding protein4e-38158
NC_016024:1099602:111210711121071112991885Candidatus Chloracidobacterium thermophilum B chromosome chromosomechlorophyllide reductase iron protein subunit X5e-37154
NC_007335:1820332:182274318227431823633891Prochlorococcus marinus str. NATL2A, complete genomelight-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein2e-36152
NC_008819:541000:542607542607543497891Prochlorococcus marinus str. NATL1A, complete genomeProtochlorophyllide reductase iron-sulfur ATP-binding protein2e-36152
NC_019940:3267436:3285102328510232861181017Thioflavicoccus mobilis 8321 chromosome, complete genomechlorophyllide reductase iron protein subunit X7e-34144
NC_007759:1356439:136389013638901364843954Syntrophus aciditrophicus SB, complete genomeflagellar synthesis regulator4e-0755.5
NC_009952:3596399:363935536393553640161807Dinoroseobacter shibae DFL 12, complete genomechromosome partitioning protein ParA5e-0651.6