Some Help

Query: NC_013410:1285857:1317756 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1317756, End: 1318895, Length: 1140

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:2838582:2854219285421928553641146Pseudomonas poae RE*1-1-14, complete genomehypothetical protein1e-1687.8
NC_009802:352641:3542673542673556011335Campylobacter concisus 13826, complete genomeketopantoate hydroxymethyltransferase1e-1171.2
NC_012796:3600630:361626836162683616912645Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-1170.1
NC_017281:30261:4323943239446361398Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomehypothetical protein7e-0858.9
NC_003912:30265:4324143241446381398Campylobacter jejuni RM1221, complete genomehypothetical protein7e-0858.9
NC_002163:29726:4496644966463631398Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehypothetical protein7e-0858.5
NC_015167:1055145:1065409106540910665961188Cellulophaga lytica DSM 7489 chromosome, complete genomehypothetical protein2e-0757
NC_017279:29737:449674496745494528Campylobacter jejuni subsp. jejuni IA3902 chromosome, completehypothetical protein9e-0755.1