Pre_GI: BLASTP Hits

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Query: NC_013410:1285857:1312223 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1312223, End: 1312816, Length: 594

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015164:493159:517086517086517685600Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein1e-42172
NC_004663:1409462:142088214208821421481600Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein3e-39161
NC_014933:510164:573641573641574204564Bacteroides helcogenes P 36-108 chromosome, complete genomeGCN5-related N-acetyltransferase1e-21102
NC_004663:1:495849585503546Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein1e-2099.4
NC_004663:6223442:495849585503546Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein1e-2099.4
NC_014933:510164:566314566314566892579Bacteroides helcogenes P 36-108 chromosome, complete genomeGCN5-related N-acetyltransferase1e-2099.4
NC_014933:510164:570189570189570737549Bacteroides helcogenes P 36-108 chromosome, complete genomeGCN5-related N-acetyltransferase1e-1789.7
NC_013162:811763:834223834223834786564Capnocytophaga ochracea DSM 7271, complete genomeGCN5-related N-acetyltransferase2e-1375.5
NC_011083:3009760:302213730221373022661525Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,acetyltransferase, gnat family1e-0756.6
NC_011205:3078732:309037030903703090894525Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853GNAT family acetyltransferase1e-0756.2
NC_012125:2938519:297990129799012980428528Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-0755.8
NC_006511:2819128:286053128605312861055525Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-0755.1
NC_011147:2814664:285606728560672856591525Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-0755.1
NC_004631:2872192:288384928838492884376528Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-0755.1
NC_003198:2856596:289799228979922898519528Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-0755.1
NC_011080:2982346:302412330241233024650528Salmonella enterica subsp. enterica serovar Newport str. SL254,acetyltransferase, gnat family3e-0755.1
NC_003197:3005842:304761930476193048146528Salmonella typhimurium LT2, complete genomeputative acetyltransferase3e-0755.1
NC_006905:2987863:299951929995193000046528Salmonella enterica subsp. enterica serovar Choleraesuis strputative acetyltransferase3e-0755.1
NC_011294:2919906:293064129306412931168528Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein3e-0755.1
NC_016810:3028421:307019530701953070722528Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity island 1 protein3e-0755.1
NC_016832:2859491:287114828711482871675528Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Acetyltransferase, gnat3e-0755.1
NC_016856:3026426:306785630678563068383528Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative acetyltransferase3e-0755.1
NC_016857:3028421:307019530701953070722528Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74pathogenicity island protein3e-0755.1
NC_016860:3029272:307104930710493071576528Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity island protein3e-0755.1
NC_016863:2974333:301610930161093016636528Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative acetyltransferase3e-0755.1
NC_017046:3027161:306893530689353069462528Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island 1 protein3e-0755.1
NC_016831:2867766:290790829079082908432525Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity island protein3e-0755.1
NC_011274:2909799:292144529214452921972528Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein3e-0755.1
NC_011149:2912219:295604929560492956576528Salmonella enterica subsp. enterica serovar Agona str. SL483,acetyltransferase, gnat family6e-0754.3