Pre_GI: BLASTP Hits

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Query: NC_013410:1285857:1306219 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1306219, End: 1307595, Length: 1377

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013410:1651000:165574216557421656419678Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein3e-1790.1
NC_013410:1953293:1964643196464319666401998Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein9e-1685.1
NC_013410:1953293:1968863196886319709562094Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein8e-1582
NC_016940:1698000:169808616980861698982897Saprospira grandis str. Lewin chromosome, complete genomehypothetical protein2e-1377.8
NC_013410:1953293:1962495196249519646302136Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein2e-1274.3
NC_013410:1953293:1960269196026919624822214Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein4e-1273.2
NC_013410:1953293:1976726197672619783151590Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein5e-1272.8
NC_013410:1953293:1970982197098219734232442Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein7e-1272.4
NC_013410:1953293:1974476197447619765602085Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein1e-1068.2
NC_013410:1255359:125927012592701259794525Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein2e-1067.8
NC_013410:1953293:1956797195679719591812385Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein2e-1067.8
NC_011059:921690:943731943731944468738Prosthecochloris aestuarii DSM 271, complete genomemajor paralogous domain protein5e-1066.2