Pre_GI: BLASTP Hits

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Query: NC_013410:1255359:1267222 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1267222, End: 1268055, Length: 834

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013410:1255359:126270612627061263536831Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein3e-113408
NC_013410:1255359:127013012701301270960831Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein1e-110399
NC_013410:1255359:127430512743051275135831Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein1e-106385
NC_013410:1953293:196797919679791968851873Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein8e-77286
NC_013410:1953293:195934919593491960272924Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein4e-73274
NC_013410:1953293:195592519559251956788864Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein3e-70265
NC_013410:1953293:197362319736231974495873Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein3e-68258
NC_005363:3562205:3581957358195735831201164Bdellovibrio bacteriovorus HD100, complete genomehypothetical protein3e-1582.8