Pre_GI: BLASTP Hits

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Query: NC_013410:1203937:1224059 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1224059, End: 1224832, Length: 774

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013165:1407000:141687314168731417655783Slackia heliotrinireducens DSM 20476, complete genomehypothetical protein6e-83306
NC_016077:998741:102781410278141028533720Acidaminococcus intestini RyC-MR95 chromosome, complete genomeexopolysaccharide biosynthesis protein7e-75280
NC_004567:1066710:107783110778311078607777Lactobacillus plantarum WCFS1, complete genomeglycosyltransferase1e-74279
NC_009699:2875386:288129028812902882060771Clostridium botulinum F str. Langeland chromosome, complete genomeexopolysaccharide biosynthesis protein3e-73275
NC_010610:1580483:161813316181331618894762Lactobacillus fermentum IFO 3956, complete genomeglycosyltransferase1e-71270
NC_012778:137064:150147150147150926780Eubacterium eligens ATCC 27750, complete genomehypothetical protein1e-70266
NC_009655:866281:874083874083874889807Actinobacillus succinogenes 130Z chromosome, complete genomehypothetical protein3e-69261
NC_013740:842841:850843850843851616774Acidaminococcus fermentans DSM 20731, complete genomeexopolysaccharide biosynthesis protein8e-69260
NC_006300:600516:608334608334609140807Mannheimia succiniciproducens MBEL55E, complete genomehypothetical protein3e-68258
NC_010278:1625695:163433616343361635091756Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,lipopolysaccharide biosynthesis glycosyltransferase7e-66250
NC_015164:325212:338645338645339421777Bacteroides salanitronis DSM 18170 chromosome, complete genomeglycosyltransferase7e-65246
NC_008525:606986:623791623791624573783Pediococcus pentosaceus ATCC 25745, complete genomeLipopolysaccharide biosynthesis glycosyltransferase5e-63240
NC_012913:626449:641723641723642457735Aggregatibacter aphrophilus NJ8700, complete genomeEpsF2e-62239
NC_014554:1019730:103265110326511033427777Lactobacillus plantarum subsp. plantarum ST-III chromosome,capsular biosynthesis protein3e-62238
NC_009053:1668500:168237216823721683145774Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein3e-61234
NC_014727:1832144:184734918473491848125777Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,lipopolysaccharide biosynthesis glycosyltransferase1e-59229
NC_017219:2292040:233059123305912331409819Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein5e-59227
NC_011593:2288993:233077323307732331591819Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,glycosyltransferase5e-59227
NC_008529:1634403:165053516505351651311777Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeLipopolysaccharide biosynthesis glycosyltransferase7e-59227
NC_008054:1617544:163527216352721636048777Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIID, Putative glycosyltransferase3e-57221
NC_018720:2097694:211129121112912112121831Bifidobacterium asteroides PRL2011 chromosome, complete genomeglycosyltransferase9e-56216
NC_013421:3279499:329069132906913291446756Pectobacterium wasabiae WPP163, complete genomehypothetical protein3e-47188
NC_013198:2088780:210106621010662101863798Lactobacillus rhamnosus GG, complete genomelipo/exopolysaccharide biosynthesis glycosyltransferase / EpsF/EpsIID2e-46186
NC_009792:714953:726948726948727709762Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-44179
NC_020063:1659795:167650916765091677279771Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein6e-43174
NC_012815:1603916:162343216234321624196765Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein1e-41170
NC_012814:1599241:162371416237141624478765Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein1e-41170
NC_011835:733320:754642754642755406765Bifidobacterium animalis subsp. lactis AD011 chromosome, completeglycosyl transferase family protein1e-41170
NC_017216:1603000:162335916233591624123765Bifidobacterium animalis subsp. lactis BLC1, complete genomeexopolysaccharide biosynthesis protein1e-41170
NC_017217:1607679:162900116290011629765765Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein1e-41170
NC_017214:299637:320954320954321799846Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeAlpha-1,3-galactosyltransferase8e-42170
NC_017215:1605917:162834816283481629193846Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Hexosyltransferase8e-42170
NC_008054:1617544:162996116299611630719759Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsII-I, Putative glycosyltransferase2e-38159
NC_008529:1634403:164514716451471645905759Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeLipopolysaccharide biosynthesis glycosyltransferase2e-38159
NC_014727:1832144:184195718419571842715759Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,lipopolysaccharide biosynthesis glycosyltransferase2e-38159
NC_015500:311845:328404328404329315912Treponema brennaborense DSM 12168 chromosome, complete genomeexopolysaccharide biosynthesis protein6e-37154
NC_013961:2260250:2271392227139222732841893Erwinia amylovora, complete genomeputative glycosyl transferase7e-35147
NC_013971:2297777:2308919230891923108111893Erwinia amylovora ATCC 49946 chromosome, complete genomeglycosyl transferase family protein7e-35147
NC_012214:1588573:1613834161383416157261893Erwinia pyrifoliae Ep1/96, complete genomeGlycosyl transferase6e-34144
NC_010694:1502019:1515307151530715171991893Erwinia tasmaniensis, complete genomeGlycosyl transferase1e-32140
NC_016612:5391706:5401253540125354031451893Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative glycosyltransferase9e-31133
NC_013204:2371499:2398272239827223994861215Eggerthella lenta DSM 2243, complete genomehypothetical protein5e-30131
NC_012731:3500545:3515172351517235170671896Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative glycosyltransferase1e-29130
NC_010498:2278306:2287536228753622894281893Escherichia coli SMS-3-5, complete genomeglycosyl transferase family protein1e-29130
NC_015738:978794:1015930101593010178191890Eggerthella sp. YY7918, complete genomeleucyl-tRNA synthetase9e-30130
NC_021066:460292:4999304999305018221893Raoultella ornithinolytica B6, complete genomeputative glycosyltransferase9e-30130
NC_015061:1902251:1915110191511019170021893Rahnella sp. Y9602 chromosome, complete genomeglycosyl transferase family 82e-29129
NC_015389:1298689:1305797130579713070021206Coriobacterium glomerans PW2 chromosome, complete genomehypothetical protein1e-28126
NC_017262:623351:635480635480636400921Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, completeglycosyl transferase family protein2e-28126
NC_008054:1649160:167502516750251675828804Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIH, Putative glycosyltransferase4e-28125
NC_014169:2234249:2253108225310822549941887Bifidobacterium longum subsp. longum JDM301 chromosome, completefamily 8 glycosyl transferase2e-25116
NC_017219:2646157:2663205266320526650911887Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein1e-24113
NC_014169:2234249:2242641224264122456763036Bifidobacterium longum subsp. longum JDM301 chromosome, completefamily 8 glycosyl transferase4e-24112
NC_014121:3399685:341332734133273413836510Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-23110
NC_017219:2646157:2657864265786426609053042Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein6e-22104
NC_011593:2650156:2661863266186326649043042Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,glycosyl transferase family protein6e-22104
NC_011593:2650156:2667300266730026690901791Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,glycosyl transferase family protein7e-21100
NC_014802:1392831:1400767140076714029232157Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completeputative sugar transferase4e-1685.1
NC_016845:3536886:3548676354867635503431668Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein3e-1375.9
NC_015977:2631789:2662385266238526642321848Roseburia hominis A2-183 chromosome, complete genomeglycosyl transferase family protein3e-0858.9