Pre_GI: BLASTP Hits

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Query: NC_013410:1203937:1222711 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1222711, End: 1224021, Length: 1311

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006347:2154906:2156840215684021582221383Bacteroides fragilis YCH46, complete genomeputative phosphoenolpyruvate phosphomutase0639
NC_015500:311845:3191933191933205391347Treponema brennaborense DSM 12168 chromosome, complete genomephosphoenolpyruvate phosphomutase7e-173607
NC_011768:1718869:1745645174564517469491305Desulfatibacillum alkenivorans AK-01, complete genomephosphoenolpyruvate phosphomutase3e-154545
NC_014935:1389000:1411132141113214124211290Nitratifractor saLSUginis DSM 16511 chromosome, complete genomephosphoenolpyruvate phosphomutase2e-148525
NC_014166:2959688:2967477296747729687631287Arcobacter nitrofigilis DSM 7299 chromosome, complete genomephosphoenolpyruvate phosphomutase2e-147522
NC_014216:2127370:2154075215407521553941320Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomephosphoenolpyruvate phosphomutase4e-137488
NC_014833:1539678:1537649153764915396882040Ruminococcus albus 7 chromosome, complete genomephosphoenolpyruvate phosphomutase1e-126453
NC_014363:645397:6644996644996657941296Olsenella uli DSM 7084 chromosome, complete genomephosphoenolpyruvate phosphomutase5e-123441
NC_011983:760113:766704766704767618915Agrobacterium radiobacter K84 chromosome 2, complete genomephosphoenolpyruvate phosphomutase protein2e-92340
NC_012779:2586175:259864825986482599562915Edwardsiella ictaluri 93-146, complete genomephosphoenolpyruvate phosphomutase, putative7e-79294
NC_016816:792460:801910801910802764855Pantoea ananatis LMG 5342, complete genomephosphoenolpyruvate phosphomutase3e-72272
NC_013956:3641368:366174336617433662597855Pantoea ananatis LMG 20103 chromosome, complete genomePepM3e-72272
NC_014479:188009:208395208395209285891Bacillus subtilis subsp. spizizenii str. W23 chromosome, completephosphoenolpyruvate mutase9e-45181
NC_014484:1690272:1702878170287817044731596Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein5e-38159
NC_016816:2684336:269375526937552694660906Pantoea ananatis LMG 5342, complete genomephosphoenolpyruvate phosphomutase8e-38158
NC_020209:397376:427331427331428200870Pseudomonas poae RE*1-1-14, complete genomephosphoenolpyruvate phosphomutase2e-37157
NC_007954:1324062:1335400133540013370371638Shewanella denitrificans OS217, complete genomePhosphoenolpyruvate phosphomutase3e-35149
NC_015138:2364500:236898623689862369936951Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completephosphoenolpyruvate phosphomutase8e-35148
NC_007925:4294472:430280343028034303762960Rhodopseudomonas palustris BisB18, complete genomePhosphoenolpyruvate phosphomutase2e-27123
NC_011772:2166000:217496321749632175871909Bacillus cereus G9842, complete genomemethylisocitrate lyase3e-1480.5
NC_011658:2275864:228447922844792285387909Bacillus cereus AH187 chromosome, complete genomemethylisocitrate lyase3e-1480.1
NC_011725:2206000:221539822153982216306909Bacillus cereus B4264 chromosome, complete genomemethylisocitrate lyase4e-1479.7
NC_014171:2177353:218754221875422188450909Bacillus thuringiensis BMB171 chromosome, complete genomemethylisocitrate lyase4e-1479.7
NC_014335:2151404:216132621613262162234909Bacillus cereus biovar anthracis str. CI chromosome, completecarboxyvinyl-carboxyphosphonate phosphorylmutase3e-1479.7
NC_005957:2196000:220468922046892205597909Bacillus thuringiensis serovar konkukian str. 97-27, completecarboxyvinyl-carboxyphosphonate phosphorylmutase; possible methylisocitrate lyase3e-1479.7
NC_012472:2240000:224880622488062249714909Bacillus cereus 03BB102, complete genomemethylisocitrate lyase3e-1479.7
NC_011773:2239753:224898822489882249896909Bacillus cereus AH820 chromosome, complete genomemethylisocitrate lyase3e-1479.7
NC_009440:217547:239047239047239871825Metallosphaera sedula DSM 5348 chromosome, complete genome2,3-dimethylmalate lyase5e-1479.3
NC_012659:2175867:218505821850582185966909Bacillus anthracis str. A0248, complete genomemethylisocitrate lyase9e-1478.6
NC_005945:2175871:218514021851402186048909Bacillus anthracis str. Sterne, complete genomecarboxyvinyl-carboxyphosphonate phosphorylmutase9e-1478.6
NC_007530:2175967:218515821851582186066909Bacillus anthracis str. 'Ames Ancestor', complete genomecarboxyvinyl-carboxyphosphonate phosphorylmutase9e-1478.6
NC_003997:2175843:218503421850342185942909Bacillus anthracis str. Ames, complete genomecarboxyvinyl-carboxyphosphonate phosphorylmutase9e-1478.6
NC_016148:1877711:191410519141051914983879Thermovirga lienii DSM 17291 chromosome, complete genome2,3-dimethylmalate lyase2e-1377.4
NC_015733:2658337:268723426872342688133900Pseudomonas putida S16 chromosome, complete genome2-methylisocitrate lyase3e-1377
NC_003106:1809137:182503918250391825785747Sulfolobus tokodaii str. 7, complete genomehypothetical carboxyvinyl-carboxyphosphonate phosphorylmutase4e-1376.6
NC_014831:2397563:240191924019192402866948Thermaerobacter marianensis DSM 12885 chromosome, complete genomemethylisocitrate lyase4e-1376.6
NC_010718:2265447:227891622789162279785870Natranaerobius thermophilus JW/NM-WN-LF, complete genomecarboxyvinyl-carboxyphosphonate phosphorylmutase4e-1376.3
NC_013205:854983:873581873581874504924Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,methylisocitrate lyase1e-1275.1
NC_012721:2694829:269610026961002696993894Burkholderia glumae BGR1 chromosome 2, complete genomeMethylisocitrate lyase3e-1273.6
NC_014618:1452927:145567714556771456558882Enterobacter cloacae SCF1 chromosome, complete genomemethylisocitrate lyase4e-1273.2
NC_012560:2315350:231606923160692316956888Azotobacter vinelandii DJ, complete genomemethylisocitrate lyase4e-1273.2
NC_021150:2315362:231608123160812316968888Azotobacter vinelandii CA6, complete genome2-methylisocitrate lyase4e-1273.2
NC_015387:155728:160876160876161775900Marinithermus hydrothermalis DSM 14884 chromosome, complete genomemethylisocitrate lyase4e-1273.2
NC_004917:366104:384535384535385410876Helicobacter hepaticus ATCC 51449, complete genomecarboxyphosphoenolpyruvate phosphomutase PrpB4e-1272.8
NC_019940:2931500:295768229576822958569888Thioflavicoccus mobilis 8321 chromosome, complete genomemethylisocitrate lyase6e-1272.4
NC_015519:426948:440373440373441245873Tepidanaerobacter sp. Re1 chromosome, complete genomecarboxyvinyl-carboxyphosphonate phosphorylmutase7e-1272
NC_005877:198522:197675197675198529855Picrophilus torridus DSM 9790, complete genomemethylisocitrate lyase1e-1171.2
NC_014374:1072218:118133711813371182281945Acidilobus saccharovorans 345-15 chromosome, complete genomePutative carboxyvinyl-carboxyphosphonate phosphorylmutase4e-1169.7
NC_014310:94645:946459464595541897Ralstonia solanacearum PSI07 megaplasmid, complete sequencemethylisocitrate lyase6e-1169.3
NC_014830:3438504:349655334965533497500948Intrasporangium calvum DSM 43043 chromosome, complete genomeisocitrate lyase and phosphorylmutase1e-1068.2
NC_018867:1161648:118653911865391186970432Dehalobacter sp. CF chromosome, complete genomeGlycerol-3-phosphate cytidylyltransferase2e-1067.8
NC_018750:6070260:607339460733946074299906Streptomyces venezuelae ATCC 10712, complete genomeMethylisocitrate lyase2e-1067.4
NC_003296:140889:140889140889141878990Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE CARBOXYVINYL-CARBOXYPHOSPHONATE PHOSPHORYLMUTASE PROTEIN3e-1066.6
NC_008054:1617544:162489516248951625359465Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIIN, Glycerol-3-phosphate cytidylyltransferase3e-0963.5
NC_014727:1832144:183862918386291839093465Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,glycerol-3-phosphate cytidylyltransferase3e-0963.5
NC_013172:3093467:312859631285963128997402Brachybacterium faecium DSM 4810, complete genomeGlycerol-3-phosphate cytidylyltransferase5e-0962.8
NC_014394:93344:110946110946111833888Gallionella capsiferriformans ES-2 chromosome, complete genomemethylisocitrate lyase5e-0962.8
NC_008529:1634403:164008116400811640545465Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCytidylyltransferase9e-0962
NC_020244:3490460:350527135052713505660390Bacillus subtilis XF-1, complete genomeglycerol-3-phosphate cytidylyltransferase1e-0861.6
NC_016047:3632489:364745236474523647841390Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeglycerol-3-phosphate cytidylyltransferase2e-0861.2
NC_004307:1815825:183077718307771831169393Bifidobacterium longum NCC2705, complete genomeprobable glycerol-3-phosphate cytidylyltransferase2e-0860.8
NC_015571:2273503:229166922916692292127459Porphyromonas gingivalis TDC60, complete genomeglycerol-3-phosphate cytidylyltransferase2e-0860.5
NC_014479:3452484:346950634695063469895390Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehypothetical protein3e-0860.5
NC_014820:71565:102510102510103118609Cenarchaeum symbiosum A, complete genomecytidylyltransferase3e-0860.1
NC_016620:341699:366380366380366841462Bacteriovorax marinus SJ, complete genomeglycerol-3-phosphate cytidylyltransferase5e-0859.3
NC_015320:790137:794759794759795250492Archaeoglobus veneficus SNP6 chromosome, complete genomecytidyltransferase-related domain-containing protein5e-0859.3
NC_013165:1665014:168354316835431683926384Slackia heliotrinireducens DSM 20476, complete genomeGlycerol-3-phosphate cytidylyltransferase7e-0858.9
NC_009342:841500:861227861227862150924Corynebacterium glutamicum R chromosome, complete genomehypothetical protein7e-0858.9
NC_006322:3628143:364290636429063643301396Bacillus licheniformis ATCC 14580, complete genomeTagD9e-0858.5
NC_014297:1100997:1115159111515911162231065Halalkalicoccus jeotgali B3 chromosome, complete genomeisocitrate lyase1e-0758.2
NC_010483:273080:285163285163285720558Thermotoga sp. RQ2, complete genomeglycerol-3-phosphate cytidylyltransferase1e-0757.8
NC_000964:3658000:367961136796113680000390Bacillus subtilis subsp. subtilis str. 168, complete genomeglycerol-3-phosphate cytidylyltransferase1e-0757.8
NC_014976:1671594:168188816818881682277390Bacillus subtilis BSn5 chromosome, complete genomeglycerol-3-phosphate cytidylyltransferase1e-0757.8
NC_017195:3459567:347249534724953472884390Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeglycerol-3-phosphate cytidylyltransferase1e-0757.8
NC_011026:2269986:230750023075002308006507Chloroherpeton thalassium ATCC 35110, complete genomerfaE bifunctional protein2e-0757.8
NC_015656:3200500:320279432027943203687894Frankia symbiont of Datisca glomerata chromosome, complete genomemethylisocitrate lyase3e-0757
NC_009848:3190619:320954732095473209945399Bacillus pumilus SAFR-032, complete genomeglycerol-3-phosphate cytidylyltransferase3e-0756.6
NC_014550:1581812:165691016569101657371462Arthrobacter arilaitensis Re117, complete genomeglycerol-3-phosphate cytidylyltransferase9e-0755.5
NC_020911:3159290:317777531777753178677903Octadecabacter antarcticus 307, complete genomePrpB-like isocitrate lyase/phosphorylmutase-family protein1e-0655.1
NC_016112:806256:812924812924813340417Methylomicrobium alcaliphilum chromosome, complete genomeglycerol-3-phosphate cytidylyltransferase1e-0654.7
NC_020908:823589:841317841317842147831Octadecabacter arcticus 238, complete genomeisocitrate lyase/phosphorylmutase family protein1e-0654.7
NC_014554:1019730:103805710380571038452396Lactobacillus plantarum subsp. plantarum ST-III chromosome,glycerol-3-phosphate cytidylyltransferase4e-0653.1
NC_012440:1841315:184666818466681847123456Persephonella marina EX-H1, complete genomebifunctional protein RfaE, domain II5e-0652.8
NC_006270:3627974:364271936427193643126408Bacillus licheniformis ATCC 14580, complete genomeglycerol-3-phosphate cytidylyltransferase8e-0652
NC_013282:2827757:284725528472552847650396Cronobacter turicensis, complete genomeGlycerol-3-phosphate cytidylyltransferase8e-0652
NC_015581:1043394:107500210750021075415414Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomecytidyltransferase-related domain-containing protein9e-0652