Pre_GI: BLASTP Hits

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Query: NC_013410:1203937:1221581 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1221581, End: 1222708, Length: 1128

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006347:2154906:2158234215823421593701137Bacteroides fragilis YCH46, complete genomeputative phosphoenolpyruvate decarboxylase4e-123441
NC_015500:311845:3180113180113191621152Treponema brennaborense DSM 12168 chromosome, complete genomephosphonopyruvate decarboxylase1e-106386
NC_011768:1718869:1744518174451817456451128Desulfatibacillum alkenivorans AK-01, complete genomephosphonopyruvate decarboxylase2e-102372
NC_014833:1539678:1539678153967815407991122Ruminococcus albus 7 chromosome, complete genomephosphonopyruvate decarboxylase3e-99362
NC_014363:645397:6626466626466637671122Olsenella uli DSM 7084 chromosome, complete genomephosphonopyruvate decarboxylase3e-97355
NC_014216:2127370:2152909215290921540781170Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomephosphonopyruvate decarboxylase4e-86318
NC_012779:2586175:2597197259719725983601164Edwardsiella ictaluri 93-146, complete genomephosphonopyruvate decarboxylase, putative2e-72273
NC_014484:1690272:1701766170176617028781113Spirochaeta thermophila DSM 6192 chromosome, complete genomephosphonopyruvate decarboxylase7e-56218
NC_020209:397376:4261864261864272831098Pseudomonas poae RE*1-1-14, complete genomephosphonopyruvate decarboxylase2e-54213
NC_015138:2364500:2369933236993323711261194Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completephosphonopyruvate decarboxylase1e-51204
NC_011983:760113:7699297699297711311203Agrobacterium radiobacter K84 chromosome 2, complete genomePyruvate Decarboxylase7e-50198
NC_014166:2959688:2966344296634429674771134Arcobacter nitrofigilis DSM 7299 chromosome, complete genomephosphonopyruvate decarboxylase1e-48194
NC_007954:1324062:1337058133705813381701113Shewanella denitrificans OS217, complete genomethiamine pyrophosphate enzyme-like TPP-binding5e-47188
NC_016816:2684336:2696403269640326975781176Pantoea ananatis LMG 5342, complete genomephosphonopyruvate decarboxylase protein2e-44179
NC_003888:7561923:7588532758853275896351104Streptomyces coelicolor A3(2), complete genomephosphonopyruvate decarboxylase (fragment)4e-41169
NC_003552:4054908:4070349407034940715121164Methanosarcina acetivorans C2A, complete genomesulfopyruvate decarboxylase3e-25116
NC_014479:188009:206828206828207388561Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative phosphonopyruvate decarboxylase subunit beta2e-1997.4
NC_007955:1523500:153426915342691534838570Methanococcoides burtonii DSM 6242, complete genomethiamine pyrophosphate enzyme-like TPP-binding5e-1995.5
NC_014408:1455851:145840214584021458944543Methanothermobacter marburgensis str. Marburg chromosome, completesulfopyruvate decarboxylase, beta subunit2e-1790.1
NC_014222:1411155:142554014255401426109570Methanococcus voltae A3 chromosome, complete genomethiamine pyrophosphate protein domain protein TPP-binding protein8e-1685.1
NC_009634:1002295:100695710069571007523567Methanococcus vannielii SB chromosome, complete genomethiamine pyrophosphate binding domain-containing protein9e-1684.7
NC_009637:920423:924428924428924985558Methanococcus maripaludis C7 chromosome, complete genomethiamine pyrophosphate binding domain-containing protein3e-1582.8
NC_010557:679656:707358707358707927570Burkholderia ambifaria MC40-6 chromosome 3, complete sequencethiamine pyrophosphate protein domain protein TPP-binding6e-1582
NC_009635:1283830:128922412892241289787564Methanococcus aeolicus Nankai-3 chromosome, complete genomethiamine pyrophosphate binding domain-containing protein7e-1581.6
NC_008392:1029134:103892810389281039497570Burkholderia cepacia AMMD chromosome 3, complete sequencethiamine pyrophosphate enzyme domain protein TPP-binding8e-1581.6
NC_009975:917337:931952931952932509558Methanococcus maripaludis C6, complete genomethiamine pyrophosphate protein domain protein TPP-binding2e-1480.5
NC_015636:832224:834474834474835034561Methanothermococcus okinawensis IH1 chromosome, complete genomesulfopyruvate decarboxylase subunit beta4e-1479.7
NC_005791:1626448:162993116299311630488558Methanococcus maripaludis S2, complete genomeSulfopyruvate decarboxylase subunit beta5e-1479
NC_015847:1712023:171549617154961716053558Methanococcus maripaludis XI chromosome, complete genomesulfopyruvate decarboxylase subunit beta7e-1478.6
NC_009135:1654131:166919516691951669752558Methanococcus maripaludis C5, complete genomethiamine pyrophosphate enzyme domain protein TPP-binding1e-1378.2
NC_014935:1389000:1412421141242114134701050Nitratifractor saLSUginis DSM 16511 chromosome, complete genomethiamine pyrophosphate tpp-binding domain-containing protein1e-1377.8
NC_020453:3103549:311897731189773119576600Agromonas oligotrophica S58 DNA, complete genomeputative Sulfopyruvate decarboxylase beta subunit6e-1375.5
NC_003551:415803:418732418732419226495Methanopyrus kandleri AV19, complete genomeAcetolactate synthase large subunit8e-0858.5
NC_007955:1523500:153376615337661534272507Methanococcoides burtonii DSM 6242, complete genomeSulfopyruvate decarboxylase9e-0755.1
NC_014479:188009:206313206313206816504Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative phosphonopyruvate decarboxylase alpha subunit4e-0652.8
NC_014408:1455851:145790614579061458397492Methanothermobacter marburgensis str. Marburg chromosome, completesulfopyruvate decarboxylase, alpha subunit5e-0652.4