Pre_GI: BLASTP Hits

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Query: NC_013410:1203937:1215569 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1215569, End: 1217026, Length: 1458

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009615:322107:3358983358983373011404Parabacteroides distasonis ATCC 8503 chromosome, complete genomeLPS biosynthesis flippase6e-92338
NC_010278:1625695:1639637163963716410881452Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,flippase Wzx5e-59229
NC_012778:137064:1543871543871558441458Eubacterium eligens ATCC 27750, complete genomepolysaccharide transporter, PST family5e-56219
NC_014033:1808782:1833611183361118350591449Prevotella ruminicola 23 chromosome, complete genomePTS system polysaccharide transporter1e-48194
NC_015500:1923514:1942703194270319441601458Treponema brennaborense DSM 12168 chromosome, complete genomepolysaccharide biosynthesis protein3e-45183
NC_017214:299637:3153163153163167791464Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeCapsular polysaccharide repeat unit transport protein1e-42174
NC_017215:1605917:1622710162271016241731464Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Oligosaccharide translocase (flippase)1e-42174
NC_012815:1603916:1617794161779416192451452Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeflippase Wzx1e-42174
NC_012814:1599241:1618076161807616195271452Bifidobacterium animalis subsp. lactis Bl-04, complete genomeflippase Wzx1e-42174
NC_017216:1603000:1617721161772116191721452Bifidobacterium animalis subsp. lactis BLC1, complete genomePolysaccharide biosynthesis protein flippase Wzx1e-42174
NC_017217:1607679:1623363162336316248141452Bifidobacterium animalis subsp. lactis V9 chromosome, completeflippase Wzx1e-42174
NC_011835:733320:7490047490047504431440Bifidobacterium animalis subsp. lactis AD011 chromosome, completeflippase Wzx1e-42174
NC_017218:534699:5473935473935488621470Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomepolysaccharide biosynthesis protein3e-40166
NC_015737:2691246:2755755275575527572211467Clostridium sp. SY8519, complete genomehypothetical protein9e-39161
NC_013530:3204825:3231873323187332333301458Xylanimonas cellulosilytica DSM 15894, complete genomepolysaccharide biosynthesis protein9e-39161
NC_017216:1603000:1627530162753016289661437Bifidobacterium animalis subsp. lactis BLC1, complete genomeLPS biosynthesis related flippase Wzx3e-38159
NC_017215:1605917:1632519163251916339551437Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Oligosaccharide translocase (flippase)3e-38159
NC_017214:299637:3251253251253265611437Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeOligosaccharide translocase (flippase)3e-38159
NC_011835:733320:7588137588137602491437Bifidobacterium animalis subsp. lactis AD011 chromosome, completeflippase Wzx3e-38159
NC_014334:1954333:1964711196471119661411431Lactobacillus casei str. Zhang chromosome, complete genomepolysaccharide Transporter, PST family4e-37156
NC_014727:1832144:1844780184478018462101431Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,mop superfamily multidrug/oligosaccharidyl-lipid/polysaccharide flippase transporter2e-36154
NC_020207:843822:8561968561968576261431Enterococcus faecium NRRL B-2354, complete genomeMembrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acid7e-36152
NC_008529:1634403:1641495164149516429281434Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePolysaccharide Transporter, PST family5e-36152
NC_008054:1617544:1626309162630916277421434Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIIL, Putative polysaccharide repeat unit transport protein1e-35151
NC_009253:3272000:3301258330125833026731416Desulfotomaculum reducens MI-1 chromosome, complete genomepolysaccharide biosynthesis protein2e-35150
NC_015975:99500:1164301164301179111482Lactobacillus ruminis ATCC 27782 chromosome, complete genomeExoploysaccharide biosynthesis flippase enzyme2e-35150
NC_016077:998741:1049625104962510510701446Acidaminococcus intestini RyC-MR95 chromosome, complete genomepolysaccharide transporter5e-35149
NC_008532:973510:9803289803289817431416Streptococcus thermophilus LMD-9, complete genomePolysaccharide Transporter, PST family6e-34145
NC_008054:1649160:1670765167076516721951431Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIK, Putative polysaccharide repeat unit transport protein6e-34145
NC_013198:2088780:2101894210189421033151422Lactobacillus rhamnosus GG, complete genomepolysaccharide transporter, PST family protein / flippase (wzx)4e-33142
NC_004567:1066710:1076392107639210778191428Lactobacillus plantarum WCFS1, complete genomerepeat unit transporter4e-33142
NC_012466:318675:3227633227633242261464Streptococcus pneumoniae JJA, complete genomeflippase Wzx1e-32141
NC_012914:469117:4852194852194866761458Paenibacillus sp. JDR-2, complete genomepolysaccharide biosynthesis protein8e-32138
NC_015500:311845:3252763252763267391464Treponema brennaborense DSM 12168 chromosome, complete genomepolysaccharide biosynthesis protein9e-32138
NC_014554:1019730:1036622103662210380371416Lactobacillus plantarum subsp. plantarum ST-III chromosome,polysaccharide biosynthesis protein2e-31137
NC_010610:1580483:1604607160460716060371431Lactobacillus fermentum IFO 3956, complete genomehypothetical protein2e-31137
NC_015385:1406419:1430883143088314323641482Treponema succinifaciens DSM 2489 chromosome, complete genomepolysaccharide biosynthesis protein5e-31135
NC_017217:1607679:1633172163317216345061335Bifidobacterium animalis subsp. lactis V9 chromosome, completeflippase Wzx6e-31135
NC_012814:1599241:1627885162788516292191335Bifidobacterium animalis subsp. lactis Bl-04, complete genomeflippase Wzx6e-31135
NC_012815:1603916:1627603162760316289371335Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeflippase Wzx6e-31135
NC_009615:487173:5063875063875078711485Parabacteroides distasonis ATCC 8503 chromosome, complete genomeCPS repeat-containing transporter1e-30135
NC_010999:2155714:2163855216385521652911437Lactobacillus casei, complete genomeRepeat unit transporter1e-30134
NC_008529:1663000:1670576167057616719071332Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePolysaccharide Transporter, PST family6e-30132
NC_014727:1877764:1889289188928918907261438Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,6e-28125
NC_006510:3321426:3363539336353933647981260Geobacillus kaustophilus HTA426, complete genomeO-antigen transporter4e-26119
NC_015185:1352171:1353568135356813548481281Desulfurobacterium thermolithotrophum DSM 11699 chromosome,polysaccharide biosynthesis protein9e-26118
NC_014624:1675500:1695467169546716969421476Eubacterium limosum KIST612 chromosome, complete genomepolysaccharide biosynthesis protein6e-25115
NC_017272:607900:6201606201606214491290Thermus thermophilus SG0.5JP17-16 chromosome, complete genomepolysaccharide biosynthesis protein7e-25115
NC_014387:993013:1005656100565610070861431Butyrivibrio proteoclasticus B316 chromosome 1, complete genomepolysaccharide biosynthesis protein1e-24114
NC_014119:977136:9835949835949848591266Burkholderia sp. CCGE1002 chromosome chromosome 3, completepolysaccharide biosynthesis protein1e-24114
NC_013730:7743954:7755334775533477566291296Spirosoma linguale DSM 74, complete genomepolysaccharide biosynthesis protein3e-24113
NC_013716:2255102:2267984226798422691951212Citrobacter rodentium ICC168, complete genomeputative O-antigen transporter6e-23108
NC_010681:934374:9486099486099498681260Burkholderia phytofirmans PsJN chromosome 1, complete sequencepolysaccharide biosynthesis protein5e-22105
NC_013946:2050871:2064784206478420660581275Meiothermus ruber DSM 1279 chromosome, complete genomepolysaccharide biosynthesis protein3e-21103
NC_006510:3321426:3341644334164433429331290Geobacillus kaustophilus HTA426, complete genomeO-antigen transporter7e-21102
NC_011026:2450325:2463753246375324650031251Chloroherpeton thalassium ATCC 35110, complete genomepolysaccharide biosynthesis protein2e-20100
NC_014935:1389000:1409861140986114111321272Nitratifractor saLSUginis DSM 16511 chromosome, complete genomepolysaccharide biosynthesis protein2e-20100
NC_014974:246404:2509712509712522931323Thermus scotoductus SA-01 chromosome, complete genomeO-antigen transporter3e-20100
NC_008054:1617544:163363016336301634133504Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete4e-20100
AC_000091:2096672:2110474211047421117211248Escherichia coli W3110 DNA, complete genomepredicted polisoprenol-linked O-antigen transporter9e-2098.6
NC_000913:2092559:2106361210636121076081248Escherichia coli K12, complete genomepredicted polisoprenol-linked O-antigen transporter9e-2098.6
NC_010473:2183567:2197369219736921986161248Escherichia coli str. K-12 substr. DH10B, complete genomepredicted polisoprenol-linked O-antigen transporter9e-2098.6
NC_012759:1983975:1998844199884420000911248Escherichia coli BW2952 chromosome, complete genomeputative polisoprenol-linked O-antigen transporter9e-2098.6
NC_014758:1207894:1237144123714412384271284Calditerrivibrio nitroreducens DSM 19672 chromosome, completepolysaccharide biosynthesis protein5e-1995.9
NC_011916:467106:4804394804394817101272Caulobacter crescentus NA1000 chromosome, complete genomeoligosaccharide translocase/flippase1e-1894.7
NC_006461:605249:6171536171536184181266Thermus thermophilus HB8, complete genomeputative O-antigen transporter7e-1892.4
NC_020054:1002906:1009197100919710104951299Fibrella aestuarina BUZ 2 drat genomeputative O-antigen transporter1e-1791.7
NC_010831:2078329:2094543209454320958171275Chlorobium phaeobacteroides BS1, complete genomepolysaccharide biosynthesis protein2e-1790.9
NC_009655:866281:8748968748968761521257Actinobacillus succinogenes 130Z chromosome, complete genomepolysaccharide biosynthesis protein3e-1790.5
NC_012483:30784:6336163361647131353Acidobacterium capsulatum ATCC 51196, complete genomeputative O-antigen transporter3e-1790.1
NC_009337:1200722:1214355121435512155691215Chlorobium phaeovibrioides DSM 265 chromosome, complete genomepolysaccharide biosynthesis protein2e-1687.8
NC_011001:1462532:1480615148061514818681254Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative exopolysaccharide transporter6e-1685.9
NC_015966:2256943:2273729227372922749701242Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomepolysaccharide biosynthesis protein5e-1582.8
NC_012779:1286500:1294276129427612955231248Edwardsiella ictaluri 93-146, complete genomeO antigen transporter1e-1481.6
NC_010658:1090104:1103246110324611044631218Shigella boydii CDC 3083-94, complete genomeWzx1e-1481.6
NC_006300:600516:6091126091126104041293Mannheimia succiniciproducens MBEL55E, complete genomeRfbX protein2e-1480.9
NC_014408:682689:7036937036937049521260Methanothermobacter marburgensis str. Marburg chromosome, completepolysaccharide biosynthesis protein5e-1479.3
NC_004757:2451919:246404024640402464840801Nitrosomonas europaea ATCC 19718, complete genome7e-1479.3
NC_014212:2776457:2790238279023827914761239Meiothermus silvanus DSM 9946 chromosome, complete genomepolysaccharide biosynthesis protein5e-1376.3
NC_006582:3827844:3842212384221238434891278Bacillus clausii KSM-K16, complete genomeO-antigen transporter6e-1375.9
NC_015224:1391088:1399234139923414004901257Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,translocase1e-1275.1
NC_013894:117644:1321121321121333981287Thermocrinis albus DSM 14484 chromosome, complete genomepolysaccharide biosynthesis protein5e-1272.8
NC_007606:1999870:2010259201025920114491191Shigella dysenteriae Sd197, complete genomeputative O-antigen transporter1e-1171.6
NC_010939:1633000:1642833164283316440951263Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative O-antigen transporter2e-1170.9
NC_009438:2939478:2952196295219629534251230Shewanella putrefaciens CN-32 chromosome, complete genomepolysaccharide biosynthesis protein6e-1169.3
NC_009615:1627961:1641634164163416428841251Parabacteroides distasonis ATCC 8503 chromosome, complete genomeO-antigen transporter9e-1168.6
NC_011415:2346474:2365729236572923669791251Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-1068.6
NC_015216:808000:8290238290238304591437Methanobacterium sp. AL-21 chromosome, complete genomepolysaccharide biosynthesis protein1e-1068.2
NC_010814:2074266:2081908208190820832631356Geobacter lovleyi SZ, complete genomepolysaccharide biosynthesis protein3e-1067
NC_015216:1278706:1296036129603612975051470Methanobacterium sp. AL-21 chromosome, complete genomepolysaccharide biosynthesis protein1e-0965.1
NC_018876:703633:7119837119837134131431Methanolobus psychrophilus R15 chromosome, complete genomepolysaccharide biosynthesis protein4e-0963.2
NC_007511:2072838:2072838207283820740941257Burkholderia sp. 383 chromosome 2, complete sequencePolysaccharide biosynthesis protein4e-0963.2
NC_015160:136055:1439691439691452281260Odoribacter splanchnicus DSM 20712 chromosome, complete genomepolysaccharide biosynthesis protein7e-0962.4
NC_003901:2479613:2511149251114925126091461Methanosarcina mazei Go1, complete genomeheteropolysaccharide repeat-containing protein1e-0861.6
NC_011529:1722829:1730948173094817323721425Thermococcus onnurineus NA1, complete genomehypothetical lipopolysaccharide O-side chain biosynthesis protein2e-0861.2
NC_014408:682689:7084907084907099021413Methanothermobacter marburgensis str. Marburg chromosome, completepolysaccharide biosynthesis protein2e-0860.5
NC_014727:1877764:187776418777641878243480Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,virulence factor mvin protein2e-0860.5
NC_010475:2537500:2546615254661525479521338Synechococcus sp. PCC 7002, complete genomepolysaccharide biosynthesis export protein4e-0860.1
NC_000961:372000:3822633822633835611299Pyrococcus horikoshii OT3, complete genomelipopolysaccharide O-side chain biosynthesis protein (O-antigen transpoter)5e-0859.7
NC_013204:2826500:2838118283811828394131296Eggerthella lenta DSM 2243, complete genomepolysaccharide biosynthesis protein2e-0757.8
NC_013165:1407000:1422687142268714239611275Slackia heliotrinireducens DSM 20476, complete genomemembrane protein involved in the export of O-antigen and teichoic acid3e-0757
NC_020260:1184174:1194615119461511958711257Cronobacter sakazakii Sp291, complete genomeO-antigen, teichoic acid lipoteichoic acids export membrane protein3e-0757
NC_015144:997587:1006361100636110075991239Weeksella virosa DSM 16922 chromosome, complete genomepolysaccharide biosynthesis protein9e-0755.5
NC_016816:1676460:1690102169010216912561155Pantoea ananatis LMG 5342, complete genomeO-antigen flippase1e-0655.1
NC_011978:15059:3298232982343791398Thermotoga neapolitana DSM 4359, complete genomePolysaccharide biosynthesis protein2e-0654.3
NC_008942:1446682:1451502145150214529741473Methanocorpusculum labreanum Z, complete genomehypothetical protein2e-0654.3
NC_008563:2182270:2195479219547921967051227Escherichia coli APEC O1, complete genomeputative O-antigen transporter3e-0653.9
NC_009511:2921448:2932278293227829335581281Sphingomonas wittichii RW1 chromosome, complete genomepolysaccharide biosynthesis protein8e-0652.4