Pre_GI: BLASTP Hits

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Query: NC_013410:1203937:1211042 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1211042, End: 1212412, Length: 1371

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009901:1693500:1708496170849617097971302Shewanella pealeana ATCC 700345, complete genomeCDP-glycerol:poly(glycerophosphate) glycerophosphotransferase7e-42171
NC_012778:263241:2901872901872916591473Eubacterium eligens ATCC 27750, complete genomehypothetical protein4e-37155
NC_010694:1502019:1520455152045515219391485Erwinia tasmaniensis, complete genomehypothetical protein3e-1790.1
NC_013971:2297777:2304220230422023056681449Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein3e-1687
NC_013961:2260250:2266693226669322681411449Erwinia amylovora, complete genomehypothetical protein3e-1687
NC_015062:58826:6865368653702211569Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencehypothetical protein1e-1171.6
NC_015587:765500:7709217709217723031383Hydrogenobaculum sp. SHO chromosome, complete genomehypothetical protein4e-1170.1
NC_015557:765500:7708667708667722481383Hydrogenobaculum sp. 3684 chromosome, complete genomehypothetical protein4e-1170.1
NC_020411:765500:7708947708947722761383Hydrogenobaculum sp. HO, complete genomehypothetical protein4e-1170.1
NC_011126:779500:7848797848797862581380Hydrogenobaculum sp. Y04AAS1, complete genomehypothetical protein5e-1169.7
NC_012214:1588573:1618974161897416204221449Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein3e-1067
NC_007907:3722500:3735503373550337378722370Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-1066.2