Pre_GI: BLASTP Hits

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Query: NC_013410:1203937:1203937 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1203937, End: 1206231, Length: 2295

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014933:3755000:3768570376857037703451776Bacteroides helcogenes P 36-108 chromosome, complete genomesignal peptide peptidase A4e-58226
NC_010475:1161000:1163563116356311653471785Synechococcus sp. PCC 7002, complete genomesignal peptide peptidase SppA, 67K type4e-40166
NC_014623:4535544:4546327454632745481051779Stigmatella aurantiaca DW4/3-1 chromosome, complete genomepeptidase s49, protease iv2e-35151
NC_006526:1976779:1979705197970519816181914Zymomonas mobilis subsp. mobilis ZM4, complete genomeperiplasmic serine protease4e-35150
NC_002488:2546495:2561252256125225631531902Xylella fastidiosa 9a5c, complete genomeprotease IV1e-33145
NC_012913:626449:6485646485646504501887Aggregatibacter aphrophilus NJ8700, complete genomesignal peptide peptidase SppA, 67K type1e-32142
NC_008570:3777469:3779795377979537816391845Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomesignal peptide peptidase SppA, 67K type1e-31138
NC_016602:2586044:2586044258604425878941851Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceprotease IV2e-31138
NC_015577:3688071:3688680368868036903141635Treponema azotonutricium ZAS-9 chromosome, complete genomepeptidase S49, protease IV2e-31137
NC_010338:1394550:1398729139872914005161788Caulobacter sp. K31, complete genomesignal peptide peptidase SppA, 67K type1e-29132
NC_006513:1379735:1379735137973513815761842Azoarcus sp. EbN1, complete genomeprotease IV4e-29130
NC_020126:10319500:1034097710340977103427641788Myxococcus stipitatus DSM 14675, complete genomesignal peptide peptidase SppA, 67K type6e-29129
NC_016822:1431200:1487840148784014896961857Shigella sonnei 53G, complete genomeprotease 46e-28126
NC_013421:2453078:2454197245419724560471851Pectobacterium wasabiae WPP163, complete genomesignal peptide peptidase SppA, 67K type2e-26121
NC_014378:4428:165021650217482981Acetohalobium arabaticum DSM 5501 chromosome, complete genomesignal peptide peptidase SppA, 36K type3e-26120
NC_007604:1967770:199146919914691992281813Synechococcus elongatus PCC 7942, complete genomesignal peptide peptidase SppA, 36K type7e-26119
NC_019978:7535:214332143322431999Halobacteroides halobius DSM 5150, complete genomesignal peptide peptidase SppA, 36K type7e-24113
NC_015672:1921023:195834619583461959218873Flexistipes sinusarabici DSM 4947 chromosome, complete genomesignal peptide peptidase SppA, 36K type1e-23112
NC_020207:2240115:2244281224428122453151035Enterococcus faecium NRRL B-2354, complete genomeProtease IV1e-23112
NC_005810:2180303:2180303218030321821531851Yersinia pestis biovar Microtus str. 91001, complete genomeprotease 44e-23110
NC_004088:2366000:2387165238716523890151851Yersinia pestis KIM, complete genomeprotease IV, a signal peptide peptidase4e-23110
NC_010634:2376245:2376245237624523780951851Yersinia pseudotuberculosis PB1/+, complete genomesignal peptide peptidase SppA, 67K type3e-23110
NC_012039:185607:202129202129203022894Campylobacter lari RM2100, complete genomeprotease IV3e-22107
NC_015636:1603664:160732116073211608253933Methanothermococcus okinawensis IH1 chromosome, complete genomesignal peptide peptidase SppA, 36K type4e-22107
NC_013939:2117663:212898621289862129843858Deferribacter desulfuricans SSM1, complete genomesignal peptide peptidase SppA1e-21105
NC_015216:1941000:196040119604011961339939Methanobacterium sp. AL-21 chromosome, complete genomesignal peptide peptidase SppA, 36K type6e-21103
NC_017278:1873934:187719018771901878128939Thermus sp. CCB_US3_UF1 chromosome, complete genomesignal peptide peptidase SppA9e-21102
NC_014330:2268773:228690422869042287737834Brachyspira pilosicoli 95/1000 chromosome, complete genomeperiplasmic serine proteases ClpP class9e-2099.4
NC_018607:1803500:180350718035071804340834Brachyspira pilosicoli B2904 chromosome, complete genomeperiplasmic serine proteases ClpP class9e-2099.4
NC_009464:180335:205843205843206742900Uncultured methanogenic archaeon RC-I, complete genomeputative protease IV9e-2099.4
NC_018604:1045774:106392310639231064756834Brachyspira pilosicoli WesB complete genomeperiplasmic serine proteases ClpP class9e-2099.4
NC_019908:982471:9842079842079853071101Brachyspira pilosicoli P43/6/78 chromosome, complete genomeperiplasmic serine proteases ClpP class1e-1999
NC_012988:32996:561025610257067966Methylobacterium extorquens DM4, complete genomepeptidase5e-1996.7
NC_011757:97281:115894115894116859966Methylobacterium chloromethanicum CM4, complete genomesignal peptide peptidase SppA, 36K type6e-1996.7
NC_005213:202400:284247284247285017771Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein1e-1895.5
NC_009483:2640403:264793626479362648832897Geobacter uraniireducens Rf4 chromosome, complete genomesignal peptide peptidase SppA, 36K type5e-1893.6
NC_014804:401313:4013134013134023291017Thermococcus barophilus MP chromosome, complete genomeprotease IV8e-1892.8
NC_007109:808331:823905823905824819915Rickettsia felis URRWXCal2, complete genomeSignal peptide peptidase SppA5e-1790.5
NC_010793:81219:897388973890646909Orientia tsutsugamushi str. Ikeda, complete genomeprotease IV1e-1688.6
NC_016631:5378810:5392974539297453940291056Granulicella mallensis MP5ACTX8 chromosome, complete genomesignal peptide peptidase SppA, 36K type3e-1687.8
NC_019907:1411124:141473214147321415667936Liberibacter crescens BT-1 chromosome, complete genomehypothetical protein3e-1687.4
NC_013016:44188:488924889249878987Neisseria meningitidis alpha14 chromosome, complete genomeputative ClpP class peptidase2e-1584.7
NC_014844:762794:762794762794763783990Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomesignal peptide peptidase SppA, 36K type3e-1584.3
NC_017505:2192284:220558922055892206575987Neisseria meningitidis alpha710 chromosome, complete genomeputative protease3e-1584.3
NC_017515:2194500:221341422134142214400987Neisseria meningitidis M04-240196 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type4e-1584
NC_002946:1935186:193991319399131940899987Neisseria gonorrhoeae FA 1090, complete genomeputative protease7e-1583.2
NC_011035:1876555:189174518917451892731987Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative protease7e-1583.2
NC_017511:1783000:179559917955991796585987Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative protease7e-1583.2
NC_003116:291661:296167296167297153987Neisseria meningitidis Z2491, complete genomeprotease7e-1583.2
NC_017512:52228:567345673457720987Neisseria meningitidis WUE 2594, complete genomeputative peptidase7e-1583.2
NC_003112:2215184:223442022344202235406987Neisseria meningitidis MC58, complete genomeputative protease7e-1583.2
NC_017501:2219803:224074022407402241726987Neisseria meningitidis 8013, complete genomeputative peptidase7e-1583.2
NC_017516:2183708:220294422029442203930987Neisseria meningitidis H44/76 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type7e-1583.2
NC_017517:2228000:225085122508512251837987Neisseria meningitidis M01-240355 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type1e-1482.8
NC_017514:2165166:218654521865452187531987Neisseria meningitidis M01-240149 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type1e-1482.8
NC_017518:2190607:221198622119862212972987Neisseria meningitidis NZ-05/33 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type1e-1482.8
NC_018691:3041851:304091430409143041891978Alcanivorax dieselolei B5 chromosome, complete genomePeptidase, S49 (Protease IV) family1e-1482
NC_015696:105748:110845110845111768924Francisella sp. TX077308 chromosome, complete genomeSignal peptide peptidase SppA, 36K type2e-1481.6
NC_007354:845500:868575868575869441867Ehrlichia canis str. Jake, complete genomePeptidase S49, SppA4e-1480.5
NC_010336:733751:748666748666749310645Francisella philomiragia subsp. philomiragia ATCC 25017, completeserine peptidase, S49 family6e-1480.1
NC_008767:2126854:214392621439262144912987Neisseria meningitidis FAM18, complete genomeputative protease1e-1379.3
NC_017513:2134308:214772421477242148710987Neisseria meningitidis G2136 chromosome, complete genomeputative signal peptide peptidase SppA, 36K type9e-1479.3
NC_015276:2171355:2185624218562421867271104Marinomonas mediterranea MMB-1 chromosome, complete genomepeptidase S499e-1479.3
NC_010120:2098000:211408421140842114995912Neisseria meningitidis 053442, complete genomeprotease IV9e-1479.3
NC_007799:392355:392355392355393221867Ehrlichia chaffeensis str. Arkansas, complete genomesignal peptide peptidase SppA6e-1376.6
NC_005244:37546:416924169242468777Pseudomonas sp. ND6 plasmid pND6-1, complete sequencepeptidase2e-1274.7
NC_008340:362000:376939376939377937999Alkalilimnicola ehrlichei MLHE-1, complete genomepeptidase S494e-1273.9
NC_011985:2902000:2903725290372529049541230Agrobacterium radiobacter K84 chromosome 1, complete genomeprotease protein7e-1273.2
NC_016002:3077648:307958730795873080525939Pseudogulbenkiania sp. NH8B, complete genomepeptidase S497e-1169.7
NC_004757:1089057:111191311119131112866954Nitrosomonas europaea ATCC 19718, complete genomePeptidase family U78e-1169.7
NC_011666:1661491:1665071166507116664081338Methylocella silvestris BL2, complete genomepeptidase S491e-1069.3
NC_020211:2882093:2885421288542128864671047Serratia marcescens WW4, complete genomeputative inner membrane peptidase1e-1068.9
NC_016612:3803130:383199638319963832916921Klebsiella oxytoca KCTC 1686 chromosome, complete genomeserine peptidase6e-1066.6
NC_017986:4885979:4887448488744848884671020Pseudomonas putida ND6 chromosome, complete genomePutative periplasmic protease3e-0964.3
NC_007645:2181739:219074021907402191729990Hahella chejuensis KCTC 2396, complete genomePeriplasmic serine protease (ClpP class)1e-0862.4
NC_002937:2263763:2266987226698722682071221Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeminor capsid protein C5e-0860.5
NC_015380:859424:874266874266875069804Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomemacromolecule degradation protein2e-0758.2
NC_017033:1052000:1078962107896210801911230Frateuria aurantia DSM 6220 chromosome, complete genomeClpP class periplasmic serine protease4e-0757.4
NC_013757:21245:3224732247335001254Geodermatophilus obscurus DSM 43160, complete genomepeptidase S497e-0756.6
NC_015381:992401:1004335100433510053961062Burkholderia gladioli BSR3 chromosome 1, complete sequencepeptidase S491e-0655.8