Pre_GI: BLASTP Hits

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Query: NC_013410:1152188:1183109 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1183109, End: 1183513, Length: 405

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018748:1443176:144317614431761443589414Emticicia oligotrophica DSM 17448 chromosome, complete genomeprotein of unknown function DUF1327e-24109
NC_013921:2293411:230680823068082307224417Thermoanaerobacter italicus Ab9 chromosome, complete genomePilT protein domain protein5e-1269.7
NC_007644:626992:684568684568684987420Moorella thermoacetica ATCC 39073, complete genomeProtein of unknown function DUF1321e-0858.9
NC_009454:358044:386179386179386598420Pelotomaculum thermopropionicum SI, complete genomenucleic acid-binding protein1e-0652
NC_007644:2452244:245289224528922453305414Moorella thermoacetica ATCC 39073, complete genomeProtein of unknown function DUF1323e-0650.8
NC_011296:1542835:155680015568001557195396Thermodesulfovibrio yellowstonii DSM 11347, complete genomehypothetical protein4e-0650.1
NC_013642:400651:404441404441404845405Thermotoga naphthophila RKU-10, complete genomePilT protein domain protein9e-0648.9