Pre_GI: BLASTP Hits

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Query: NC_013410:1152188:1152188 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1152188, End: 1152730, Length: 543

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015737:2146953:215068921506892151231543Clostridium sp. SY8519, complete genomehypothetical protein6e-69259
NC_013895:1203000:120887912088791209424546Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeglutathione peroxidase1e-63242
NC_013171:312500:315525315525316001477Anaerococcus prevotii DSM 20548, complete genomeGlutathione peroxidase1e-42172
NC_020291:1149887:117144611714461171982537Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeglutathione peroxidase GpxA1e-40165
NC_013205:289291:292767292767293264498Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Peroxiredoxin5e-38157
NC_017518:1701958:170543717054371705970534Neisseria meningitidis NZ-05/33 chromosome, complete genomeglutathione peroxidase6e-38156
NC_017167:328752:330538330538331056519Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1glutathione peroxidase3e-37154
NC_003366:1091766:111144211114421111918477Clostridium perfringens str. 13, complete genomegluthatione peroxidase3e-37154
NC_008261:1048515:106818010681801068656477Clostridium perfringens ATCC 13124, complete genomeglutathione peroxidase3e-37154
NC_020291:1149887:116957411695741170047474Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeglutathione peroxidase Gpo3e-36150
NC_007925:4060635:407854240785424079018477Rhodopseudomonas palustris BisB18, complete genomeGlutathione peroxidase2e-34145
NC_013166:784339:786993786993787478486Kangiella koreensis DSM 16069, complete genomePeroxiredoxin2e-34145
NC_014541:2122788:212544421254442125926483Ferrimonas balearica DSM 9799 chromosome, complete genomePeroxiredoxin5e-34143
NC_014323:4355266:435801443580144358499486Herbaspirillum seropedicae SmR1 chromosome, complete genomeglutathione peroxidase1e-33142
NC_012470:1370418:138928413892841389778495Streptococcus equi subsp. zooepidemicus, complete genomeglutathione peroxidase1e-33142
NC_004193:375416:599592599592600068477Oceanobacillus iheyensis HTE831, complete genomegluthatione peroxidase3e-33140
NC_017192:1028866:103419310341931034669477Arcobacter sp. L, complete genomeglutathione peroxidase2e-32138
NC_011770:4924127:492412749241274924609483Pseudomonas aeruginosa LESB58, complete genomeputative glutathione peroxidase5e-32137
NC_008752:261903:279275279275279769495Acidovorax avenae subsp. citrulli AAC00-1, complete genomeglutathione peroxidase3e-32137
NC_016947:4186150:419086241908624191350489Mycobacterium intracellulare MOTT-02 chromosome, complete genomeglutathione peroxidase3e-31134
NC_002488:1775629:179763317976331798205573Xylella fastidiosa 9a5c, complete genomeglutathione peroxidase-like protein4e-31134
NC_020063:2011019:203073820307382031289552Enterobacteriaceae bacterium strain FGI 57, complete genomeglutathione peroxidase4e-30130
NC_016830:4010637:401369940136994014250552Pseudomonas fluorescens F113 chromosome, complete genomeglutathione peroxidase5e-30130
NC_017047:3085000:313500531350053135556552Rahnella aquatilis HX2 chromosome, complete genomeputative glutathione peroxidase1e-29129
NC_013889:1382705:140584614058461406349504Thioalkalivibrio sp. K90mix chromosome, complete genomePeroxiredoxin1e-29129
NC_018665:1233084:123457712345771235053477Exiguobacterium antarcticum B7 chromosome, complete genomeglutathione peroxidase3e-29127
NC_009512:4287605:432202143220214322509489Pseudomonas putida F1, complete genomeGlutathione peroxidase9e-29126
NC_010556:1292232:130606613060661306545480Exiguobacterium sibiricum 255-15, complete genomeGlutathione peroxidase2e-28125
NC_016940:4026774:405244340524434053012570Saprospira grandis str. Lewin chromosome, complete genomeperoxiredoxin2e-28125
NC_010175:3712456:372737837273783727851474Chloroflexus aurantiacus J-10-fl, complete genomeGlutathione peroxidase4e-28124
NC_004631:1271500:128908612890861289637552Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative glutathione peroxidase9e-28122
NC_003197:1401603:142064314206431421194552Salmonella typhimurium LT2, complete genomevitamin B12 transport protein9e-28122
NC_011083:1408202:142568614256861426237552Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,peroxiredoxin Hyr19e-28122
NC_016810:1358456:137749613774961378047552Salmonella enterica subsp. enterica serovar Typhimurium strputative glutathione peroxidase/vitamin B12 transport periplasmic protein BtuE9e-28122
NC_016856:1411579:143061914306191431170552Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative glutathione peroxidase9e-28122
NC_016857:1358456:137749613774961378047552Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative glutathione peroxidase9e-28122
NC_016860:1399290:141833014183301418881552Salmonella enterica subsp. enterica serovar Typhimurium strputative glutathione peroxidase9e-28122
NC_016863:1359769:137880913788091379360552Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative glutathione peroxidase9e-28122
NC_017046:1358531:137757113775711378122552Salmonella enterica subsp. enterica serovar Typhimurium str. 798glutathione peroxidase/vitamin B12 transport periplasmic protein BtuE9e-28122
NC_015634:2595500:261857826185782619051474Bacillus coagulans 2-6 chromosome, complete genomePeroxiredoxin3e-27121
NC_014840:205723:235679235679236161483Pantoea sp. At-9b plasmid pPAT9B03, complete sequencePeroxiredoxin6e-27120
NC_016023:1959255:196342119634211963894474Bacillus coagulans 36D1 chromosome, complete genomeglutathione peroxidase5e-27120
NC_012912:2800884:280935328093532809835483Dickeya zeae Ech1591, complete genomePeroxiredoxin4e-27120
NC_014618:2705769:271085427108542711336483Enterobacter cloacae SCF1 chromosome, complete genomeperoxiredoxin4e-27120
NC_015968:2195645:222343922234392223921483Enterobacter asburiae LF7a chromosome, complete genomeglutathione peroxidase9e-27119
NC_007509:832473:836139836139836687549Burkholderia sp. 383 chromosome 3, complete sequenceGlutathione peroxidase1e-26119
NC_013956:1810026:181284418128441813272429Pantoea ananatis LMG 20103 chromosome, complete genomeGpo2e-26118
NC_016514:1142607:114922811492281149764537Enterobacter cloacae EcWSU1 chromosome, complete genomeglutathione peroxidase4e-26117
NC_013592:2059138:207054520705452071027483Dickeya dadantii Ech586, complete genomePeroxiredoxin7e-26116
NC_011831:547181:554498554498554971474Chloroflexus aggregans DSM 9485, complete genomeGlutathione peroxidase9e-26116
NC_013854:3200912:321745732174573218062606Azospirillum sp. B510, complete genomeglutathione peroxidase2e-25115
NC_015859:3346473:336411433641143364626513Corynebacterium variabile DSM 44702 chromosome, complete genomeglutathione peroxidase1e-24112
NC_015740:2692023:271686327168632717345483Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeglutathione peroxidase2e-24112
NC_006677:2042387:205968420596842060178495Gluconobacter oxydans 621H, complete genomeGlutathione peroxidase2e-24111
NC_013851:2317091:233037023303702330915546Allochromatium vinosum DSM 180 chromosome, complete genomePeroxiredoxin1e-22105
NC_009659:3520093:354784135478413548605765Janthinobacterium sp. Marseille chromosome, complete genomeglutathione peroxidase8e-1993.2
NC_018607:1803500:182014118201411820494354Brachyspira pilosicoli B2904 chromosome, complete genomeglutathione peroxidase1e-1892.8
NC_018604:1045774:104850910485091048862354Brachyspira pilosicoli WesB complete genomeglutathione peroxidase1e-1892.8
NC_019908:982471:100036210003621000715354Brachyspira pilosicoli P43/6/78 chromosome, complete genomeglutathione peroxidase1e-1892.8
NC_014330:2268773:227150822715082271861354Brachyspira pilosicoli 95/1000 chromosome, complete genomeglutathione peroxidase1e-1892.8
NC_005071:87907:141551141551142036486Prochlorococcus marinus str. MIT 9313, complete genomeGlutathione peroxidase3e-1891.3
NC_009482:87193:938179381794287471Synechococcus sp. RCC307 chromosome, complete genomeglutathione peroxidase2e-1788.6
NC_016830:5109953:511372051137205114271552Pseudomonas fluorescens F113 chromosome, complete genomeglutathione peroxidase2e-1582
NC_015977:442493:467278467278467478201Roseburia hominis A2-183 chromosome, complete genomeperoxiredoxin3e-1167.8
NC_015977:442493:465856465856466020165Roseburia hominis A2-183 chromosome, complete genomeglutathione peroxidase8e-1166.6
NC_007954:3171081:321068232106823211260579Shewanella denitrificans OS217, complete genomeglutathione peroxidase5e-1063.9