Pre_GI: BLASTN Hits

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Query: NC_013361:2169948 Escherichia coli O26:H11 str. 11368 chromosome, complete genome

Start: 2169948, End: 2193737, Length: 23790

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O26:H11 str. 11368 is a human enterohemorrhagic E. coli which attaches to and effaces cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002695:21583142158314218207123758Escherichia coli O157:H7 str. Sakai, complete genome028820BLASTN svgBLASTP svg
AP010958:22729192272919229869725779Escherichia coli O103:H2 str. 12009 DNA, complete genome09987BLASTN svgBLASTP svg
CP002185:17708151770815179359922785Escherichia coli W, complete genome09549BLASTN svgBLASTP svg
CU928160:16688421668842169164522804Escherichia coli IAI1 chromosome, complete genome09525BLASTN svgBLASTP svg
NC_011750:15650001565000158659921600Escherichia coli IAI39 chromosome, complete genome09341BLASTN svgBLASTP svg
NC_004431:30409533040953306393422982Escherichia coli CFT073, complete genome09178BLASTN svgBLASTP svg
NC_002695:28939512893951291868324733Escherichia coli O157:H7 str. Sakai, complete genome08861BLASTN svgBLASTP svg
NC_002655:27306592730659276187131213Escherichia coli O157:H7 EDL933, complete genome08732BLASTN svgBLASTP svg
AP010958:14725061472506149531022805Escherichia coli O103:H2 str. 12009 DNA, complete genome08044BLASTN svgBLASTP svg
NC_002655:19091391909139193312123983Escherichia coli O157:H7 EDL933, complete genome06203BLASTN svgBLASTP svg
NC_002695:26554452655445267786922425Escherichia coli O157:H7 str. Sakai, complete genome04801BLASTN svgBLASTP svg
AP010958:13057121305712133215626445Escherichia coli O103:H2 str. 12009 DNA, complete genome04793BLASTN svgBLASTP svg
NC_011750:19313841931384195623124848Escherichia coli IAI39 chromosome, complete genome04276BLASTN svgBLASTP svg
NC_004431:13529061352906137651123606Escherichia coli CFT073, complete genome04117BLASTN svgBLASTP svg
NC_011751:13774571377457140058923133Escherichia coli UMN026 chromosome, complete genome03985BLASTN svgBLASTP svg
NC_011750:91995391995393907219120Escherichia coli IAI39 chromosome, complete genome03550BLASTN svgBLASTP svg
CU928145:82436782436784378119415Escherichia coli 55989 chromosome, complete genome03400BLASTN svgBLASTP svg
NC_002695:17946351794635181624421610Escherichia coli O157:H7 str. Sakai, complete genome03400BLASTN svgBLASTP svg
NC_011748:82436782436784378119415Escherichia coli 55989, complete genome03400BLASTN svgBLASTP svg
AP010958:2134556*2134556215269018135Escherichia coli O103:H2 str. 12009 DNA, complete genome02950BLASTN svgBLASTP svg
AP010958:86786986786989060722739Escherichia coli O103:H2 str. 12009 DNA, complete genome02916BLASTN svgBLASTP svg
NC_002655:22647732264773228824723475Escherichia coli O157:H7 EDL933, complete genome02619BLASTN svgBLASTP svg
NC_011750:527470*52747055213724668Escherichia coli IAI39 chromosome, complete genome02559BLASTN svgBLASTP svg
NC_002655:91965491965493956619913Escherichia coli O157:H7 EDL933, complete genome02357BLASTN svgBLASTP svg
NC_002695:91750991750994039822890Escherichia coli O157:H7 str. Sakai, complete genome02296BLASTN svgBLASTP svg
NC_013716:12989321298932132714328212Citrobacter rodentium ICC168, complete genome01485BLASTN svgBLASTP svg
NC_013716:1756545*1756545177694320399Citrobacter rodentium ICC168, complete genome01411BLASTN svgBLASTP svg
NC_002695:15713891571389159815826770Escherichia coli O157:H7 str. Sakai, complete genome01243BLASTN svgBLASTP svg
NC_002655:16559441655944168171125768Escherichia coli O157:H7 EDL933, complete genome01243BLASTN svgBLASTP svg
AC_000091:55892055892058720428285Escherichia coli W3110 DNA, complete genome0926BLASTN svgBLASTP svg
NC_000913:558920*55892058509926180Escherichia coli K12, complete genome0926BLASTN svgBLASTP svg
NC_010473:498252*49825252418825937Escherichia coli str. K-12 substr. DH10B, complete genome0926BLASTN svgBLASTP svg
NC_010473:62381062381065051726708Escherichia coli str. K-12 substr. DH10B, complete genome0926BLASTN svgBLASTP svg
NC_002695:3468873*3468873351343744565Escherichia coli O157:H7 str. Sakai, complete genome0767BLASTN svgBLASTP svg
AP010958:60471960471962691322195Escherichia coli O103:H2 str. 12009 DNA, complete genome0761BLASTN svgBLASTP svg
NC_009800:16575501657550168574228193Escherichia coli HS, complete genome1e-178634BLASTN svgBLASTP svg
AC_000091:16270491627049165562928581Escherichia coli W3110 DNA, complete genome1e-171611BLASTN svgBLASTP svg
CP002516:2305659*2305659232825322595Escherichia coli KO11, complete genome1e-171611BLASTN svgBLASTP svg
NC_000913:1625500*1625500165193926440Escherichia coli K12, complete genome1e-171611BLASTN svgBLASTP svg
NC_008563:50119975011997503931827322Escherichia coli APEC O1, complete genome5e-156559BLASTN svgBLASTP svg
NC_010473:1712984*1712984174109928116Escherichia coli str. K-12 substr. DH10B, complete genome3e-145523BLASTN svgBLASTP svg
NC_020181:2097066*2097066212464227577Enterobacter aerogenes EA1509E, complete genome1e-141511BLASTN svgBLASTP svg
NC_009801:17566101756610177871522106Escherichia coli E24377A, complete genome2e-140507BLASTN svgBLASTP svg
NC_011751:14460731446073147872932657Escherichia coli UMN026 chromosome, complete genome6e-140505BLASTN svgBLASTP svg
NC_008563:20413452041345206368122337Escherichia coli APEC O1, complete genome2e-139504BLASTN svgBLASTP svg
NC_011751:68041768041770234121925Escherichia coli UMN026 chromosome, complete genome9e-136492BLASTN svgBLASTP svg
NC_004431:30126683012668303118918522Escherichia coli CFT073, complete genome5e-131476BLASTN svgBLASTP svg
NC_008563:15054051505405154006134657Escherichia coli APEC O1, complete genome8e-127462BLASTN svgBLASTP svg
NC_011750:19788011978801200896030160Escherichia coli IAI39 chromosome, complete genome1e-125458BLASTN svgBLASTP svg
NC_002655:3538656*3538656358072742072Escherichia coli O157:H7 EDL933, complete genome1e-91345BLASTN svgBLASTP svg
NC_013716:33278813327881336492937049Citrobacter rodentium ICC168, complete genome1e-88335BLASTN svgBLASTP svg
NC_007613:10380001038000106059922600Shigella boydii Sb227, complete genome3e-74287BLASTN svgBLASTP svg
NC_004431:14439681443968146977025803Escherichia coli CFT073, complete genome6e-66260BLASTN svgBLASTP svg
NC_007946:12805081280508130218721680Escherichia coli UTI89, complete genome6e-66260BLASTN svgBLASTP svg
NC_008563:12178041217804124159923796Escherichia coli APEC O1, complete genome6e-66260BLASTN svgBLASTP svg
NC_011080:27224922722492274217119680Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-65258BLASTN svgBLASTP svg
NC_003197:27207262720726274079420069Salmonella typhimurium LT2, complete genome2e-65258BLASTN svgBLASTP svg
NC_010498:12101451210145123409923955Escherichia coli SMS-3-5, complete genome9e-65256BLASTN svgBLASTP svg
NC_008258:1934479*1934479196306928591Shigella flexneri 5 str. 8401, complete genome9e-65256BLASTN svgBLASTP svg
NC_006905:13424741342474137811135638Salmonella enterica subsp. enterica serovar Choleraesuis str3e-58234BLASTN svgBLASTP svg
CU928145:29908029908032372424645Escherichia coli 55989 chromosome, complete genome3e-43184BLASTN svgBLASTP svg
NC_007946:289425*28942536040270978Escherichia coli UTI89, complete genome3e-43184BLASTN svgBLASTP svg
NC_008253:334467*33446741611981653Escherichia coli 536, complete genome3e-43184BLASTN svgBLASTP svg
NC_011748:29908029908032372424645Escherichia coli 55989, complete genome3e-43184BLASTN svgBLASTP svg
NC_011740:62140862140864031618909Escherichia fergusonii ATCC 35469, complete genome2e-41178BLASTN svgBLASTP svg
NC_010498:301000*30100034338442385Escherichia coli SMS-3-5, complete genome7e-41176BLASTN svgBLASTP svg
NC_004431:364000*36400042492660927Escherichia coli CFT073, complete genome7e-41176BLASTN svgBLASTP svg
NC_009832:2211154*2211154224619035037Serratia proteamaculans 568, complete genome3e-37165BLASTN svgBLASTP svg
NC_009800:2788164*2788164280740719244Escherichia coli HS, complete genome1e-30143BLASTN svgBLASTP svg
AC_000091:1407693*1407693143069823006Escherichia coli W3110 DNA, complete genome2e-22115BLASTN svgBLASTP svg
NC_000913:1404000*1404000142700823009Escherichia coli K12, complete genome2e-22115BLASTN svgBLASTP svg
NC_004337:20359452035945205669020746Shigella flexneri 2a str. 301, complete genome2e-22115BLASTN svgBLASTP svg
NC_004741:20097692009769203209922331Shigella flexneri 2a str. 2457T, complete genome2e-22115BLASTN svgBLASTP svg
NC_008258:2045000*2045000206275017751Shigella flexneri 5 str. 8401, complete genome2e-22115BLASTN svgBLASTP svg
NC_010473:1493983*1493983151640422422Escherichia coli str. K-12 substr. DH10B, complete genome2e-22115BLASTN svgBLASTP svg
NC_011740:27374672737467275914021674Escherichia fergusonii ATCC 35469, complete genome9e-22113BLASTN svgBLASTP svg
CP002797:1960000*1960000198508025081Escherichia coli NA114, complete genome1e-20109BLASTN svgBLASTP svg
NC_007946:28947932894793291753922747Escherichia coli UTI89, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008563:29099452909945293044120497Escherichia coli APEC O1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015062:58826588268328124456Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence3e-1281.8BLASTN svgBLASTP svg
CP002797:4812799*4812799483159918801Escherichia coli NA114, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013716:5141269*5141269517008828820Citrobacter rodentium ICC168, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011740:45203734520373454479624424Escherichia fergusonii ATCC 35469, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014121:16826381682638172492542288Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-0867.9BLASTN svgBLASTP svg