Pre_GI: BLASTP Hits

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Query: NC_013355:1332263:1353512 Zymomonas mobilis subsp. mobilis NCIB 11163, complete genome

Start: 1353512, End: 1354225, Length: 714

Host Lineage: Zymomonas mobilis; Zymomonas; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: Isolation: Spoiled beer; Temp: Mesophile. The natural habitat of this organism includes sugar-rich plant saps where the bacterium ferments sugar to ethanol. The high conversion of sugars to ethanol makes this organism useful in industrial production systems, particularly in production of bioethanol for fuel. A recombinant strain of this bacterium is utilized for the conversion of sugars, particularly xylose, which is not utilized by another common sugar-fermenting organism such as yeast, to ethanol. Since xylose is a common breakdown product of cellulose or a waste component of the agricultural industry, it is an attractive source for ethanol production. Zymomonas mobilis was chosen for this process as it is ethanol-tolerant (up to 120 grams of ethanol per litre) and productive (5-10% more ethanol than Saccharomyces). This bacterium ferments using the Enter-Doudoroff pathway, with the result that less carbon is used in cellular biomass production and more ends up as ethanol, another factor that favors this organism for ethanol production.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008044:3024125:304033430403343041047714Silicibacter sp. TM1040, complete genomeribonuclease PH9e-84309
NC_020064:4751097:475182447518244752540717Serratia marcescens FGI94, complete genomeRNAse PH3e-79294
NC_006677:1391984:140471014047101405432723Gluconobacter oxydans 621H, complete genomeRibonuclease PH3e-78291
NC_007645:6461267:647819764781976478913717Hahella chejuensis KCTC 2396, complete genomeribonuclease PH3e-78291
NC_015381:992401:101626010162601016991732Burkholderia gladioli BSR3 chromosome 1, complete sequenceRibonuclease PH7e-78290
NC_009792:4658909:468115646811564681872717Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-76285
NC_007912:4661141:466549946654994666218720Saccharophagus degradans 2-40, complete genometRNA nucleotidyltransferase2e-76285
NC_011094:3778000:380276538027653803481717Salmonella enterica subsp. enterica serovar Schwarzengrund strribonuclease PH3e-76284
NC_003197:3902500:392667939266793927395717Salmonella typhimurium LT2, complete genomeribonuclease PH3e-76284
NC_006511:3690828:371533837153383716054717Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCribonuclease PH3e-76284
NC_011149:3822000:384604638460463846762717Salmonella enterica subsp. enterica serovar Agona str. SL483,ribonuclease PH3e-76284
NC_011080:3875320:389982938998293900545717Salmonella enterica subsp. enterica serovar Newport str. SL254,ribonuclease PH3e-76284
NC_006905:3845000:386897938689793869695717Salmonella enterica subsp. enterica serovar Choleraesuis strribonuclease PH3e-76284
NC_011147:3686500:371100837110083711724717Salmonella enterica subsp. enterica serovar Paratyphi A strribonuclease PH3e-76284
NC_011205:3942500:396638039663803967096717Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853ribonuclease PH3e-76284
NC_016863:3864000:388797838879783888694717Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1ribonuclease PH3e-76284
NC_016860:3925500:394957539495753950291717Salmonella enterica subsp. enterica serovar Typhimurium strribonuclease PH3e-76284
NC_016857:3924000:394799439479943948710717Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74ribonuclease PH3e-76284
NC_016856:3916500:394037139403713941087717Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sribonuclease PH3e-76284
NC_016810:3923988:394799339479933948709717Salmonella enterica subsp. enterica serovar Typhimurium strRNase PH3e-76284
NC_011294:3782655:380778338077833808499717Salmonella enterica subsp. enterica serovar Enteritidis strribonuclease PH3e-76284
NC_007613:3637832:366143236614323662148717Shigella boydii Sb227, complete genomeRNase PH9e-76283
NC_002655:4606000:462867646286764629392717Escherichia coli O157:H7 EDL933, complete genomeribonuclease PH9e-76283
NC_010658:3774110:379865637986563799372717Shigella boydii CDC 3083-94, complete genomeribonuclease PH9e-76283
NC_011415:4040211:406402440640244064740717Escherichia coli SE11 chromosome, complete genomeribonuclease PH9e-76283
NC_011745:4226186:424999842499984250738741Escherichia coli ED1a chromosome, complete genomeribonuclease PH8e-76283
NC_016816:127802:142418142418143134717Pantoea ananatis LMG 5342, complete genomeribonuclease PH5e-76283
NC_016845:5162481:516694351669435167698756Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,tRNA nucleotidyltransferase2e-75282
NC_011748:4167043:419085641908564191596741Escherichia coli 55989, complete genomeribonuclease PH1e-75282
CU928145:4167043:419085641908564191596741Escherichia coli 55989 chromosome, complete genomeribonuclease PH1e-75282
NC_004337:3590323:378614837861483786864717Shigella flexneri 2a str. 301, complete genomeribonuclease PH1e-75282
NC_017328:3794105:381834838183483819064717Shigella flexneri 2002017 chromosome, complete genomeRibonuclease PH1e-75282
NC_009648:4359875:436506443650644365780717Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeribonuclease PH1e-75282
NC_011283:105245:116731116731117447717Klebsiella pneumoniae 342 chromosome, complete genomeribonuclease PH1e-75282
NC_012731:5074000:507924350792435079959717Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeribonuclease PH1e-75282
NC_012759:3675396:370218337021833702899717Escherichia coli BW2952 chromosome, complete genomeribonuclease PH1e-75282
NC_013850:109500:121927121927122643717Klebsiella variicola At-22 chromosome, complete genomeribonuclease PH2e-75281
NC_010694:63654:811888118881904717Erwinia tasmaniensis, complete genomeRibonuclease PH (tRNA nucleotidyltransferase)3e-75281
NC_015761:3611993:363653336365333637249717Salmonella bongori NCTC 12419, complete genomeRNase PH4e-75280
NC_011992:863174:883013883013883747735Acidovorax ebreus TPSY, complete genomeribonuclease PH1e-74279
NC_013971:73037:986099860999325717Erwinia amylovora ATCC 49946 chromosome, complete genomeribonuclease PH2e-74278
NC_013961:73037:986099860999325717Erwinia amylovora, complete genomeribonuclease PH2e-74278
NC_013421:4790696:481638548163854817101717Pectobacterium wasabiae WPP163, complete genomeribonuclease PH2e-74278
NC_014973:1257625:127843012784301279149720Geobacter sp. M18 chromosome, complete genomeribonuclease PH1e-73275
NC_014307:1271121:128896112889611289677717Ralstonia solanacearum CFBP2957 chromosome, complete genomeRNAse ph (tRNA nucleotidyltransferase)3e-73274
NC_000913:3786124:381388638138863814572687Escherichia coli K12, complete genomeribonuclease PH5e-73273
NC_012918:3558500:355923135592313559950720Geobacter sp. M21 chromosome, complete genomeribonuclease PH1e-72272
NC_008700:367949:387592387592388305714Shewanella amazonensis SB2B, complete genometRNA nucleotidyltransferase1e-72272
NC_007940:669143:671027671027671746720Rickettsia bellii RML369-C, complete genomeRibonuclease PH2e-72272
NC_009883:641491:643375643375644094720Rickettsia bellii OSU 85-389, complete genomeribonuclease PH2e-72271
NC_007954:334795:357751357751358464714Shewanella denitrificans OS217, complete genomeribonuclease PH8e-72270
NC_009138:2110500:212565921256592126393735Herminiimonas arsenicoxydans, complete genomeRNase PH7e-72270
NC_007802:179780:197503197503198132630Jannaschia sp. CCS1, complete genomeribonuclease PH7e-72270
NC_017046:3923000:394682039468203947506687Salmonella enterica subsp. enterica serovar Typhimurium str. 798RNase PH9e-72269
NC_012125:3840000:386383238638323864518687Salmonella enterica subsp. enterica serovar Paratyphi C strainribonuclease PH1e-71269
NC_008577:4533574:453731545373154538028714Shewanella sp. ANA-3 chromosome 1, complete sequenceribonuclease PH2e-71268
NC_008322:373531:392019392019392732714Shewanella sp. MR-7, complete genomeribonuclease PH2e-71268
NC_013456:212150:215900215900216616717Vibrio sp. Ex25 chromosome 1, complete genomeribonuclease PH5e-71267
NC_016901:414670:433015433015433728714Shewanella baltica OS678 chromosome, complete genomeribonuclease PH2e-70265
NC_011761:2067695:208934320893432090071729Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeribonuclease PH5e-70263
NC_016602:173314:177120177120177836717Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceribonuclease PH5e-70263
NC_014532:3967463:396914939691493969886738Halomonas elongata DSM 2581, complete genomeribonuclease PH1e-69262
NC_008609:2446246:249366324936632494382720Pelobacter propionicus DSM 2379, complete genomeribonuclease PH7e-69260
NC_013517:2437574:246236824623682463066699Sebaldella termitidis ATCC 33386, complete genomeribonuclease PH1e-68259
NC_007760:3848190:386933438693343870053720Anaeromyxobacter dehalogenans 2CP-C, complete genomeribonuclease PH3e-68258
NC_010572:5445081:544700954470095447746738Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ribonuclease PH4e-68258
NC_017518:1558000:157290815729081573636729Neisseria meningitidis NZ-05/33 chromosome, complete genomeribonuclease PH4e-68257
NC_017514:761000:761596761596762324729Neisseria meningitidis M01-240149 chromosome, complete genomeribonuclease PH4e-68257
NC_017505:1516348:153183215318321532560729Neisseria meningitidis alpha710 chromosome, complete genomeribonuclease PH4e-68257
NC_002939:1926084:196079119607911961507717Geobacter sulfurreducens PCA, complete genomeribonuclease PH3e-67254
NC_015953:2640500:265852326585232659260738Streptomyces sp. SirexAA-E chromosome, complete genomeribonuclease PH7e-67253
NC_016582:8031000:803137980313798032110732Streptomyces bingchenggensis BCW-1 chromosome, complete genomeribonuclease PH2e-66251
NC_016114:4614924:461677646167764617513738Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeribonuclease PH3e-66251
NC_013939:420500:429654429654430370717Deferribacter desulfuricans SSM1, complete genometRNA nucleotidyltransferase9e-66249
NC_011830:4645453:465980946598094660552744Desulfitobacterium hafniense DCB-2, complete genomeribonuclease PH5e-65247
NC_003997:4273579:428889942888994289636738Bacillus anthracis str. Ames, complete genomeribonuclease PH1e-63243
NC_012472:4255729:429438642943864295123738Bacillus cereus 03BB102, complete genomeribonuclease PH1e-63243
NC_012659:4273606:428892642889264289663738Bacillus anthracis str. A0248, complete genomeribonuclease PH1e-63243
NC_013791:579842:595196595196595951756Bacillus pseudofirmus OF4 chromosome, complete genomeribonuclease PH9e-64243
NC_014171:4317520:434973043497304350467738Bacillus thuringiensis BMB171 chromosome, complete genomeribonuclease PH8e-64243
NC_003888:3138905:315650131565013157238738Streptomyces coelicolor A3(2), complete genomeribonuclease PH8e-64243
NC_017208:4435573:448120944812094481946738Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeribonuclease PH1e-63242
NC_015672:1921023:195498819549881955704717Flexistipes sinusarabici DSM 4947 chromosome, complete genomeribonuclease PH4e-63241
NC_003454:339345:3403193403193416231305Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeRibonuclease PH5e-63240
NC_006322:2851215:286750728675072868247741Bacillus licheniformis ATCC 14580, complete genomeribonuclease PH9e-63239
NC_006270:2850354:2866646286664628680341389Bacillus licheniformis ATCC 14580, complete genomeribonuclease PH9e-63239
NC_014964:1695000:171088917108891711674786Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeribonuclease PH3e-62238
NC_010321:1703000:171867617186761719461786Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeribonuclease PH3e-62238
NC_008261:2770468:279133027913302792076747Clostridium perfringens ATCC 13124, complete genomeribonuclease PH3e-62238
NC_016516:1751336:177056517705651771329765Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeribonuclease PH2e-62238
NC_018870:427357:428399428399429124726Thermacetogenium phaeum DSM 12270 chromosome, complete genomeribonuclease Rph6e-62237
NC_020126:2883194:288691928869192887632714Myxococcus stipitatus DSM 14675, complete genomeribonuclease PH7e-62236
NC_019897:2696587:271572727157272716473747Thermobacillus composti KWC4 chromosome, complete genomeribonuclease PH1e-61236
NC_008262:2433979:245355324535532454299747Clostridium perfringens SM101, complete genomeribonuclease PH2e-61235
NC_014039:1766049:178170517817051782469765Propionibacterium acnes SK137 chromosome, complete genometRNA nucleotidyltransferase2e-61235
NC_010424:1563033:158853915885391589324786Candidatus Desulforudis audaxviator MP104C, complete genomeribonuclease PH8e-61233
NC_019978:2036779:203677920367792037603825Halobacteroides halobius DSM 5150, complete genomeribonuclease PH1e-60233
NC_015064:2900907:290353729035372904274738Acidobacterium sp. MP5ACTX9 chromosome, complete genomeribonuclease PH2e-60232
NC_014314:238043:281578281578282300723Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeribonuclease PH3e-60231
NC_013315:3689422:3700908370090837022571350Clostridium difficile CD196 chromosome, complete genomeribonuclease Ph9e-60229
NC_013894:1194458:121149912114991212266768Thermocrinis albus DSM 14484 chromosome, complete genomeribonuclease PH7e-59226
NC_011126:779500:807552807552808319768Hydrogenobaculum sp. Y04AAS1, complete genomeribonuclease PH7e-58223
NC_010545:1691999:171193117119311712704774Corynebacterium urealyticum DSM 7109, complete genomeribonuclease PH8e-58223
NC_010723:420025:423461423461424210750Clostridium botulinum E3 str. Alaska E43, complete genomeribonuclease PH3e-57221
NC_010674:426256:429716429716430465750Clostridium botulinum B str. Eklund 17B, complete genomeribonuclease PH3e-57221
NC_020411:765500:794094794094794861768Hydrogenobaculum sp. HO, complete genomeribonuclease PH4e-57221
NC_015587:765500:794122794122794889768Hydrogenobaculum sp. SHO chromosome, complete genomeRibonuclease PH4e-57221
NC_015557:765500:794067794067794834768Hydrogenobaculum sp. 3684 chromosome, complete genomeribonuclease PH4e-57221
NC_008555:1204000:120549112054911206237747Listeria welshimeri serovar 6b str. SLCC5334, complete genomeribonuclease PH2e-56218
NC_011297:1167615:117485111748511175573723Dictyoglomus thermophilum H-6-12, complete genomeribonuclease PH5e-56217
NC_015389:1610756:162937416293741630114741Coriobacterium glomerans PW2 chromosome, complete genomeRNAse PH1e-55216
NC_018720:457289:459443459443460207765Bifidobacterium asteroides PRL2011 chromosome, complete genomeribonuclease PH1e-55216
NC_012489:1874415:188003318800331880776744Gemmatimonas aurantiaca T-27, complete genomeribonuclease PH1e-55216
NC_011661:1332309:135524413552441355966723Dictyoglomus turgidum DSM 6724, complete genomeribonuclease PH2e-55215
NC_014363:1902868:192612119261211926924804Olsenella uli DSM 7084 chromosome, complete genomeRNAse PH3e-52204
NC_014666:7152782:715342671534267154178753Frankia sp. EuI1c chromosome, complete genomeribonuclease PH3e-51201
NC_010102:3851500:387562538756253876149525Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-49196
NC_015518:761380:770666770666771397732Acidianus hospitalis W1 chromosome, complete genomeexosome complex exonuclease 14e-1891.7
NC_015435:1781492:179047517904751791212738Metallosphaera cuprina Ar-4 chromosome, complete genomeexosome complex exonuclease Rrp411e-1687
NC_012632:1399017:140637114063711407108738Sulfolobus islandicus M.16.27 chromosome, complete genomeexosome complex exonuclease Rrp412e-1686.3
NC_017276:1206256:121361012136101214347738Sulfolobus islandicus REY15A chromosome, complete genomeexosome complex exonuclease 15e-1684.7
NC_012726:1292671:131422513142251314962738Sulfolobus islandicus M.16.4 chromosome, complete genomeexosome complex exonuclease Rrp415e-1684.7
NC_012588:1318879:132623313262331326970738Sulfolobus islandicus M.14.25 chromosome, complete genomeexosome complex exonuclease Rrp415e-1684.7
NC_012589:1395151:140250514025051403242738Sulfolobus islandicus L.S.2.15, complete genomeexosome complex exonuclease 16e-1684.3
NC_012622:1294479:130183313018331302570738Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeexosome complex exonuclease Rrp416e-1684.3
NC_013769:1403324:141067814106781411415738Sulfolobus islandicus L.D.8.5 chromosome, complete genomeexosome complex exonuclease 16e-1684.3
NC_017954:345430:376543376543377271729Thermogladius cellulolyticus 1633 chromosome, complete genomeribosomal RNA-processing protein RRP41/SKI61e-1583.6
NC_014002:809816:823878823878824771894Methanohalophilus mahii DSM 5219 chromosome, complete genomeribosomal RNA-processing protein RRP41/SKI61e-1583.6
NC_017275:1335763:134311713431171343854738Sulfolobus islandicus HVE10/4 chromosome, complete genomeexosome complex exonuclease 12e-1582.8
NC_015315:416140:416140416140416877738Thermoproteus uzoniensis 768-20 chromosome, complete genomeexosome complex exonuclease Rrp413e-1582
NC_009033:791515:844062844062844784723Staphylothermus marinus F1, complete genomeexosome complex exonuclease 11e-1479.7
NC_013926:183057:190038190038190775738Aciduliprofundum boonei T469 chromosome, complete genomeexosome complex exonuclease 17e-1477.4
NC_018876:2604055:2612708261270826137481041Methanolobus psychrophilus R15 chromosome, complete genomeribosomal RNA-processing protein RRP41/SKI68e-1477.4
NC_014160:1239811:125122012512201251969750Thermosphaera aggregans DSM 11486 chromosome, complete genomeribosomal RNA-processing protein RRP41/SKI68e-1477.4
NC_015320:893686:906984906984907724741Archaeoglobus veneficus SNP6 chromosome, complete genomeexosome complex exonuclease 12e-1375.9
NC_019977:1859953:187448218744821875465984Methanomethylovorans hollandica DSM 15978, complete genomearchaeal exosome-like complex exonuclease 13e-1375.5
NC_002689:309940:319203319203319949747Thermoplasma volcanium GSS1, complete genomeexosome complex exonuclease 13e-1375.5
NC_015474:105075:120959120959121708750Pyrococcus sp. NA2 chromosome, complete genomeexosome complex exonuclease Rrp414e-1375.1
NC_015216:2213427:222069422206942221425732Methanobacterium sp. AL-21 chromosome, complete genomeexosome complex exonuclease 15e-1374.7
NC_002578:1333827:134400513440051344751747Thermoplasma acidophilum DSM 1728, complete genomeexosome complex exonuclease 15e-1374.7
NC_000868:571500:576482576482577231750Pyrococcus abyssi GE5, complete genomeexosome complex exonuclease 18e-1373.9
NC_007181:459626:487876487876488607732Sulfolobus acidocaldarius DSM 639, complete genomeexosome complex exonuclease 12e-1272.8
NC_003413:1448377:146516314651631465915753Pyrococcus furiosus DSM 3638, complete genomeexosome complex exonuclease 13e-1272.4
NC_014253:575360:5869585869585879591002Methanohalobium evestigatum Z-7303 chromosome, complete genomeexosome complex exonuclease 13e-1272
NC_007355:3153386:3161834316183431633391506Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceexosome complex exonuclease 13e-1272
NC_003364:1282000:130362613036261304366741Pyrobaculum aerophilum str. IM2, complete genomeexosome complex exonuclease 14e-1271.6
NC_013741:424278:435541435541436275735Archaeoglobus profundus DSM 5631, complete genomeexosome complex exonuclease 15e-1271.2
NC_014961:1257414:126892612689261269657732Desulfurococcus mucosus DSM 2162 chromosome, complete genomeribosomal RNA-processing protein RRP41/SKI66e-1271.2
NC_000961:1366000:138154913815491382298750Pyrococcus horikoshii OT3, complete genomeexosome complex exonuclease 12e-1169.3
NC_014374:1072218:112745911274591128187729Acidilobus saccharovorans 345-15 chromosome, complete genomeProbable exosome complex exonuclease 13e-1168.6
NC_016645:383763:383763383763384437675Pyrobaculum sp. 1860 chromosome, complete genomeexosome complex exonuclease Rrp412e-1066.6
NC_015435:1781492:178962217896221790473852Metallosphaera cuprina Ar-4 chromosome, complete genomeexosome complex RNA-binding protein Rrp421e-0963.5
NC_007181:459626:487042487042487872831Sulfolobus acidocaldarius DSM 639, complete genomeexosome complex exonuclease 23e-0962.4
NC_013926:183057:189233189233190045813Aciduliprofundum boonei T469 chromosome, complete genome3' exoribonuclease8e-0857.4
NC_014253:575360:586186586186586968783Methanohalobium evestigatum Z-7303 chromosome, complete genome3' exoribonuclease2e-0755.8
NC_014002:809816:824758824758825543786Methanohalophilus mahii DSM 5219 chromosome, complete genomeribosomal RNA-processing protein RRP421e-0653.5
NC_015216:2213427:221990322199032220694792Methanobacterium sp. AL-21 chromosome, complete genome3' exoribonuclease4e-0652
NC_019977:1859953:187545518754551876237783Methanomethylovorans hollandica DSM 15978, complete genomeRNase PH-related exoribonuclease9e-0650.4