Pre_GI: BLASTP Hits

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Query: NC_013353:3474077:3498650 Escherichia coli O103:H2 str. 12009, complete genome

Start: 3498650, End: 3499015, Length: 366

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CP002185:3167738:319311031931103194057948Escherichia coli W, complete genome7e-66248
CP002516:903241:912019912019912966948Escherichia coli KO11, complete genome7e-66248
NC_010468:906957:915739915739916686948Escherichia coli ATCC 8739, complete genometype III secretion system apparatus protein YscQ/HrcQ4e-65246
AP010958:3474077:349865034986503499015366Escherichia coli O103:H2 str. 12009 DNA, complete genome9e-65244
NC_013364:3552284:357686335768633577228366Escherichia coli O111:H- str. 11128, complete genome3e-64243
NC_013361:3867558:389213138921313892496366Escherichia coli O26:H11 str. 11368 chromosome, complete genome3e-64243
CU928145:3196173:322078432207843221149366Escherichia coli 55989 chromosome, complete genomefragment of Type III secretion apparatus protein (part 1)3e-64243
NC_011748:3196173:322078432207843221149366Escherichia coli 55989, complete genome3e-64243
NC_011751:3285646:330988733098873310834948Escherichia coli UMN026 chromosome, complete genomesurface presentation of antigens protein SpaO3e-60229
NC_009800:2995958:302233930223393023286948Escherichia coli HS, complete genometype III secretion apparatus protein EpaO4e-58223
NC_013008:3761467:378478337847833785769987Escherichia coli O157:H7 str. TW14359 chromosome, complete genomesurface presentation of antigens protein SpaO4e-49192
NC_011353:3805819:383005738300573831043987Escherichia coli O157:H7 str. EC4115 chromosome, complete genome4e-49192
NC_002655:3769643:379296537929653793951987Escherichia coli O157:H7 EDL933, complete genometype III secretion protein4e-49192
NC_002695:3702344:372566037256603726646987Escherichia coli O157:H7 str. Sakai, complete genometype III secretion protein4e-49192
NC_011094:2913500:294153129415312942442912Salmonella enterica subsp. enterica serovar Schwarzengrund strsurface presentation of antigens protein SpaO3e-0754.3
NC_012125:2938519:296824629682462969145900Salmonella enterica subsp. enterica serovar Paratyphi C strainsurface presentation of antigens protein SpaO3e-0754.3
NC_016831:2867766:289625928962592897170912Salmonella enterica subsp. enterica serovar Gallinarum/pullorumsurface presentation of antigens protein (associated with type III secretion and virulence)3e-0753.9
NC_006905:2987863:298786329878632988774912Salmonella enterica subsp. enterica serovar Choleraesuis strtype III secretion protein3e-0753.9
NC_011080:2982346:301083930108393011750912Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein, YscQ/HrcQ family3e-0753.9
NC_011205:3078732:307873230787323079643912Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853surface presentation of antigens protein SpaO3e-0753.9
NC_011274:2909799:290979929097992910710912Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91surface presentation of antigens protein SpaO3e-0753.9
NC_017046:3027161:305565130556513056550900Salmonella enterica subsp. enterica serovar Typhimurium str. 798surface presentation of antigens protein (associated with type III secretion and virulence)5e-0753.1
NC_003197:3005842:303433530343353035246912Salmonella typhimurium LT2, complete genometype III secretion protein5e-0753.1
NC_016810:3028421:305691130569113057822912Salmonella enterica subsp. enterica serovar Typhimurium strsurface presentation of antigens protein (associated with type III secretion and virulence)5e-0753.1
NC_016856:3026426:305457230545723055483912Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssurface presentation of antigens protein SpaO5e-0753.1
NC_016857:3028421:305691130569113057822912Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74surface presentation of antigens protein SpaO5e-0753.1
NC_016860:3029272:305776530577653058676912Salmonella enterica subsp. enterica serovar Typhimurium strsurface presentation of antigens protein SpaO5e-0753.1
NC_016863:2974333:300282530028253003736912Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1surface presentation of antigens protein SpaO5e-0753.1
NC_006511:2819128:284887128488712849782912Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtype III secretion protein5e-0753.1
NC_011147:2814664:284440728444072845318912Salmonella enterica subsp. enterica serovar Paratyphi A strsurface presentation of antigens protein SpaO5e-0753.1
NC_010102:2967464:299731729973172998228912Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-0753.1
NC_016832:2859491:285949128594912860402912Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Surface presentation of antigens protein SpaO1e-0651.6
NC_003198:2856596:288633528863352887246912Salmonella enterica subsp. enterica serovar Typhi str. CT18,type III secretion protein1e-0651.6
NC_004631:2872192:287219228721922873103912Salmonella enterica subsp. enterica serovar Typhi Ty2, completetype III secretion protein1e-0651.6
NC_011149:2912219:294286129428612943772912Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein, YscQ/HrcQ family2e-0651.2