Pre_GI: BLASTP Hits

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Query: NC_013316:81969:84193 Clostridium difficile R20291, complete genome

Start: 84193, End: 84942, Length: 750

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013171:1194500:1197242119724211985371296Anaerococcus prevotii DSM 20548, complete genomethiamine biosynthesis protein ThiC9e-22103
NC_014166:228293:2317042317042330531350Arcobacter nitrofigilis DSM 7299 chromosome, complete genomethiamine biosynthesis protein ThiC1e-21103
NC_014393:3425694:3445998344599834473051308Clostridium cellulovorans 743B chromosome, complete genomethiamine biosynthesis protein ThiC5e-21101
NC_008701:1310857:1322458132245813237501293Pyrobaculum islandicum DSM 4184, complete genomethiamine biosynthesis protein ThiC5e-21101
NC_008262:784878:7865867865867878961311Clostridium perfringens SM101, complete genomethiamine biosynthesis protein ThiC1e-20100
NC_003366:842000:8437918437918451011311Clostridium perfringens str. 13, complete genomethiamine biosynthesis protein ThiC1e-20100
NC_008817:1574506:1585928158592815872981371Prochlorococcus marinus str. MIT 9515, complete genomeThiC family4e-1995.1
NC_015474:72103:8067480674819601287Pyrococcus sp. NA2 chromosome, complete genomeThiamine biosynthesis protein (thiC)4e-1995.1
NC_009091:1514770:1526173152617315275431371Prochlorococcus marinus str. MIT 9301, complete genomeThiC family6e-1994.4
NC_012691:1144715:1164820116482011666671848Tolumonas auensis DSM 9187, complete genomethiamine biosynthesis protein ThiC8e-1994
NC_015676:2099930:2102183210218321034631281Methanosalsum zhilinae DSM 4017 chromosome, complete genomethiamine biosynthesis protein ThiC8e-1994
NC_015499:491423:4981804981804994781299Thermodesulfobium narugense DSM 14796 chromosome, complete genomePhosphomethylpyrimidine synthase1e-1894
NC_014002:1772060:1789501178950117907841284Methanohalophilus mahii DSM 5219 chromosome, complete genomehydroxymethylpyrimidine synthase2e-1892.4
NC_013520:533803:5521175521175534211305Veillonella parvula DSM 2008, complete genomethiamine biosynthesis protein ThiC2e-1892.4
NC_013169:2045000:2055895205589520575591665Kytococcus sedentarius DSM 20547, complete genomehydroxymethylpyrimidine synthase4e-1892
NC_005125:1161000:1196979119697911983581380Gloeobacter violaceus PCC 7421, complete genomethiamine biosynthesis protein ThiC4e-1891.7
NC_017030:4588167:4601993460199346038641872Corallococcus coralloides DSM 2259 chromosome, complete genomethiamine biosynthesis protein ThiC7e-1890.9
NC_016641:2476634:2479881247988124816681788Paenibacillus terrae HPL-003 chromosome, complete genomethiamine biosynthesis protein ThiC8e-1890.9
NC_003295:112778:1303681303681322631896Ralstonia solanacearum GMI1000, complete genomethiamine biosynthesis protein ThiC9e-1890.5
NC_005090:1812833:1836897183689718382461350Wolinella succinogenes DSM 1740, complete genomethiamine biosynthesis protein ThiC1e-1790.5
NC_016751:857359:8839158839158852161302Marinitoga piezophila KA3 chromosome, complete genomethiamine biosynthesis protein ThiC1e-1790.5
NC_005071:172364:1785041785041798831380Prochlorococcus marinus str. MIT 9313, complete genomethiamine biosynthesis protein ThiC1e-1790.1
NC_008820:211616:2153122153122166911380Prochlorococcus marinus str. MIT 9303, complete genomeThiC family protein1e-1790.1
NC_018876:1489895:1491358149135814926471290Methanolobus psychrophilus R15 chromosome, complete genomehydroxymethylpyrimidine synthase1e-1790.1
NC_007955:1566189:1569731156973115710141284Methanococcoides burtonii DSM 6242, complete genomethiamine biosynthesis protein ThiC1e-1790.1
NC_018515:3600869:3614552361455236158501299Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehydroxymethylpyrimidine synthase3e-1789
NC_017954:934616:9418969418969432391344Thermogladius cellulolyticus 1633 chromosome, complete genomethiamine biosynthesis protein ThiC6e-1787.8
NC_010120:144000:1472231472231491241902Neisseria meningitidis 053442, complete genomethiamin biosynthesis protein6e-1787.8
NC_014253:2113233:2113233211323321145131281Methanohalobium evestigatum Z-7303 chromosome, complete genomethiamine biosynthesis protein ThiC8e-1787.4
NC_004578:5623783:5646584564658456484731890Pseudomonas syringae pv. tomato str. DC3000, complete genomethiamine biosynthesis protein ThiC8e-1787.4
NC_007796:1291671:1293690129369012949011212Methanospirillum hungatei JF-1, complete genomethiamine biosynthesis protein ThiC1e-1687
NC_015593:2103815:2135701213570121375691869Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completephosphomethylpyrimidine synthase1e-1686.7
NC_009515:616432:6245116245116257851275Methanobrevibacter smithii ATCC 35061, complete genomethiamine biosynthesis protein ThiC2e-1686.3
NC_003454:249304:2520382520382533391302Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completethiamine biosynthesis protein ThiC3e-1685.9
NC_012589:564343:5729805729805742811302Sulfolobus islandicus L.S.2.15, complete genomethiamine biosynthesis protein ThiC3e-1685.5
NC_002754:1749834:1759304175930417606051302Sulfolobus solfataricus P2, complete genomethiamine biosynthesis protein ThiC3e-1685.5
NC_019977:65205:8065280652819411290Methanomethylovorans hollandica DSM 15978, complete genomethiamine biosynthesis protein ThiC3e-1685.5
NC_012982:2415237:2425168242516824270601893Hirschia baltica ATCC 49814, complete genomethiamine biosynthesis protein ThiC5e-1684.7
NC_015638:1824794:1853281185328118551431863Lacinutrix sp. 5H-3-7-4 chromosome, complete genomephosphomethylpyrimidine synthase2e-1583.2
NC_011901:491783:5185495185495204381890Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completethiamine biosynthesis protein ThiC2e-1582.4
NC_003228:2973266:2985122298512229868161695Bacteroides fragilis NCTC 9343, complete genomethiamine biosynthesis protein ThiC3e-1582
NC_006347:2899653:2911508291150829132021695Bacteroides fragilis YCH46, complete genomethiamine biosynthesis protein ThiC3e-1582
NC_002488:1775629:1794923179492317967281806Xylella fastidiosa 9a5c, complete genomethiamine biosynthesis protein ThiC8e-1580.9
NC_009956:88354:98310983101001181809Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequencethiamine biosynthesis protein ThiC1e-1480.5
NC_010513:1162232:1162232116223211640881857Xylella fastidiosa M12 chromosome, complete genomethiamine biosynthesis protein ThiC1e-1480.1
NC_019974:1184871:1260121126012112619171797Natronococcus occultus SP4, complete genomehydroxymethylpyrimidine synthase2e-1479.7
NC_015437:767572:7842717842717855781308Selenomonas sputigena ATCC 35185 chromosome, complete genomePhosphomethylpyrimidine synthase2e-1479.7
NC_015518:1095879:1098922109892211002501329Acidianus hospitalis W1 chromosome, complete genomethiamine biosynthesis protein ThiC2e-1479.7
NC_011988:924721:9260479260479278791833Agrobacterium vitis S4 chromosome 2, complete genomethiamine biosynthesis protein ThiC3e-1479
NC_009635:94937:1108721108721121521281Methanococcus aeolicus Nankai-3 chromosome, complete genomethiamine biosynthesis protein ThiC3e-1479
NC_015574:114426:1289481289481302461299Methanobacterium sp. SWAN-1 chromosome, complete genomephosphomethylpyrimidine synthase3e-1479
NC_018515:3600869:3613252361325236145321281Desulfosporosinus meridiei DSM 13257 chromosome, complete genomethiamine biosynthesis protein ThiC4e-1478.6
NC_008278:874015:8740158740158759851971Frankia alni ACN14a, complete genome5'-phosphoryl-5-aminoimidazole = 4-amino-5-hydroxymethyl-2-methylpyrimidine-P5e-1478.2
NC_017059:1727095:1731863173186317335571695Rhodospirillum photometricum DSM 122, complete genomeThiamine biosynthesis protein ThiC4e-1375.1
NC_002677:363432:3774873774873791301644Mycobacterium leprae TN, complete genomethiamine biosynthesis protein ThiC5e-1375.1
NC_011896:363448:3775033775033791461644Mycobacterium leprae Br4923, complete genomeputative thiamine biosynthesis protein5e-1375.1
NC_003888:4314389:4321756432175643235941839Streptomyces coelicolor A3(2), complete genomethiamine biosynthesis protein ThiC8e-1374.3