Pre_GI: BLASTP Hits

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Query: NC_013316:2968000:2971022 Clostridium difficile R20291, complete genome

Start: 2971022, End: 2971375, Length: 354

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017179:2895571:289847628984762898829354Clostridium difficile BI1, complete genomehypothetical protein9e-51198
NC_013315:2887559:289046428904642890817354Clostridium difficile CD196 chromosome, complete genomehypothetical protein9e-51198
NC_014220:837926:837926837926838261336Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeprotein of unknown function DUF12906e-2199.4
NC_012658:1581486:159902815990281599378351Clostridium botulinum Ba4 str. 657 chromosome, complete genomesmall basic protein5e-2096.3
NC_020291:2873000:289073728907372891129393Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein6e-1682.8
NC_009380:2664419:267895226789522679284333Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein6e-1166.2
NC_009953:2867864:288097128809712881303333Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein1e-1065.1
NC_021064:1211480:123444112344411234773333Propionibacterium avidum 44067, complete genomesmall basic protein1e-0961.6
NC_018750:1092224:109782010978201098152333Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein2e-0961.6