Pre_GI: BLASTP Hits

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Query: NC_013316:2623199:2623199 Clostridium difficile R20291, complete genome

Start: 2623199, End: 2624602, Length: 1404

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013315:2531019:2542643254264325440461404Clostridium difficile CD196 chromosome, complete genomehypothetical protein0806
NC_017179:2539031:2550655255065525520401386Clostridium difficile BI1, complete genomehypothetical protein0794
NC_014633:837588:8738038738038751671365Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceYidE/YbjL duplication3e-120432
NC_020291:4033000:4039412403941240408061395Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative permease8e-103374
NC_003454:2113464:2130094213009421315001407Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeIntegral membrane protein5e-90332
NC_003228:3143470:3143470314347031450681599Bacteroides fragilis NCTC 9343, complete genomehypothetical protein8e-1582
NC_013854:3200912:3220030322003032216791650Azospirillum sp. B510, complete genomehypothetical protein3e-1376.6
NC_015572:2262374:2278929227892922805961668Methylomonas methanica MC09 chromosome, complete genomeYidE/YbjL duplication3e-1376.6
NC_006347:2861498:2879888287988828815761689Bacteroides fragilis YCH46, complete genomeputative potassium uptake protein8e-1375.5
NC_012125:3941974:3941974394197439436351662Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-1274.3
NC_011149:3930358:3932028393202839336891662Salmonella enterica subsp. enterica serovar Agona str. SL483,putative potassium uptake protein TrkA3e-1273.9
NC_004631:3809678:3825031382503138266921662Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-1273.9
NC_016832:3798475:3813828381382838154891662Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1273.9
NC_011083:4020000:4021736402173640233971662Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative potassium uptake protein TrkA2e-1273.9
NC_011294:3880500:3882184388218438838451662Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-1273.9
NC_010102:3955479:3955700395570039573611662Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1273.9
NC_006511:3794017:3795686379568637973471662Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-1273.9
NC_003197:4005857:4007527400752740091881662Salmonella typhimurium LT2, complete genomehypothetical protein2e-1273.9
NC_011080:3976441:3978111397811139797721662Salmonella enterica subsp. enterica serovar Newport str. SL254,putative potassium uptake protein TrkA2e-1273.9
NC_011094:3887648:3889318388931838909791662Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-1273.9
NC_011147:3789696:3791365379136537930261662Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-1273.9
NC_016856:4019549:4021219402121940228801662Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-1273.9
NC_016860:4110968:4112638411263841142991662Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-1273.9
NC_016863:3967156:3968826396882639704871662Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-1273.9
NC_017046:4025998:4027668402766840293291662Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-1273.9
NC_016831:3779611:3795874379587437975351662Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-1273.9
NC_006905:3942753:3947180394718039488411662Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein2e-1273.9
NC_010067:3753971:3770794377079437724551662Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1273.2
NC_015761:3698520:3698520369852037001811662Salmonella bongori NCTC 12419, complete genomehypothetical protein3e-1273.2
NC_015224:4473230:4495484449548444971451662Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein5e-1272.8
NC_003198:3824187:3839541383954138412021662Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-1272.8
NC_016857:4025767:4028841402884140305021662Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative potassium uptake protein TrkA6e-1272.8
NC_016810:4027170:4028840402884040305011662Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein6e-1272.8
NC_011205:4038884:4040553404055340422141662Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-1272
NC_004337:3590323:3886506388650638881671662Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-1171.2
NC_011757:1288637:1303572130357213051671596Methylobacterium chloromethanicum CM4, complete genomeYidE/YbjL duplication2e-1170.9
NC_010172:31264:4135741357429521596Methylobacterium extorquens PA1, complete genomeYidE/YbjL duplication2e-1170.9
NC_012917:1923059:1946007194600719476951689Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeYidE/YbjL duplication4e-1169.7
NC_011274:3799696:3815052381505238170281977Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-1068.2
NC_020064:1611820:1626138162613816279221785Serratia marcescens FGI94, complete genomeputative permease1e-1068.2
NC_016860:959609:9823139823139839981686Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-0965.1
NC_003197:920000:9427099427099443941686Salmonella typhimurium LT2, complete genomehypothetical protein1e-0965.1
NC_014973:2425994:2443662244366224452181557Geobacter sp. M18 chromosome, complete genomeYidE/YbjL duplication1e-0964.7
NC_006905:946418:9704569704569721411686Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein1e-0964.7
NC_011145:1732499:1757262175726217588961635Anaeromyxobacter sp. K, complete genomeYidE/YbjL duplication2e-0963.9
NC_007760:2611608:2617388261738826190221635Anaeromyxobacter dehalogenans 2CP-C, complete genomeYidE/YbjL like transporter3e-0963.5
NC_013508:2356865:2361941236194123637671827Edwardsiella tarda EIB202, complete genomepredicted permease3e-0963.5
NC_012779:2424967:2429771242977124314591689Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-0963.5
NC_007973:2150962:2158538215853821602231686Ralstonia metallidurans CH34 chromosome 1, complete sequenceYidE/YbjL duplication6e-0962.8
NC_016612:3361802:3373500337350033749061407Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative transporter6e-0962.4
NC_014311:1309562:1323566132356613252481683Ralstonia solanacearum PSI07 chromosome, complete genometransporter2e-0860.8
NC_010002:4287439:4309299430929943110681770Delftia acidovorans SPH-1, complete genomeYidE/YbjL duplication domain-containing protein2e-0860.5
NC_014306:642152:6439626439626456621701Erwinia billingiae Eb661, complete genomeAlanine/aspartate exchanger4e-0859.7
NC_014306:642152:6457016457016473861686Erwinia billingiae Eb661, complete genomeAlanine/aspartate exchanger, AAE family1e-0758.2
NC_013446:2623528:2645628264562826473191692Comamonas testosteroni CNB-2, complete genomeYidE/YbjL duplication1e-0758.2
NC_014933:3251000:3269320326932032709841665Bacteroides helcogenes P 36-108 chromosome, complete genomeYidE/YbjL duplication4e-0756.6