Pre_GI: BLASTP Hits

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Query: NC_013316:2033906:2079197 Clostridium difficile R20291, complete genome

Start: 2079197, End: 2080003, Length: 807

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012781:700226:727157727157727990834Eubacterium rectale ATCC 33656, complete genomehypothetical protein2e-140498
NC_012781:2552723:257076925707692571602834Eubacterium rectale ATCC 33656, complete genomehypothetical protein2e-140498
NC_015385:2050648:206670720667072067507801Treponema succinifaciens DSM 2489 chromosome, complete genomehelix-turn-helix domain protein6e-62237
NC_013316:2033906:206067020606702061518849Clostridium difficile R20291, complete genometranscription regulator (yobd protein)8e-62237
NC_009706:2925000:293402829340282934369342Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein6e-1994.7
NC_009706:2925000:293371829337182934023306Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein1e-1686.7
NC_011837:2856500:286519628651962865525330Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-1686.7
NC_014246:1402500:141964714196471420006360Mobiluncus curtisii ATCC 43063 chromosome, complete genomehypothetical protein6e-1581.6
NC_015573:2040500:204189420418942042295402Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0757.4
NC_009253:3017280:302629030262903026709420Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator3e-0755.8
NC_015958:2174731:218947921894792190027549Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehelix-turn-helix domain-containing protein5e-0755.1
NC_014538:2158131:218091821809182181331414Thermoanaerobacter sp. X513 chromosome, complete genomehelix-turn-helix domain-containing protein8e-0754.3
NC_020995:3300751:330534333053433305561219Enterococcus casseliflavus EC20, complete genomehypothetical protein1e-0653.9
NC_013921:1915377:192814219281421928690549Thermoanaerobacter italicus Ab9 chromosome, complete genometranscriptional regulator, XRE family1e-0653.9
NC_009495:2479465:252016025201602520594435Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding phage protein6e-0651.6