Pre_GI: BLASTP Hits

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Query: NC_013316:1:9450 Clostridium difficile R20291, complete genome

Start: 9450, End: 9857, Length: 408

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009089:1:945094509857408Clostridium difficile 630, complete genomeanti-sigma-B factor (serine-protein kinase)1e-72271
NC_014614:6115:111521115211604453Clostridium sticklandii, complete genomeRsbW3e-38156
NC_009922:1:9821982110249429Alkaliphilus oremlandii OhILAs, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase7e-30129
NC_018664:1:948094809899420Clostridium acidurici 9a chromosome, complete genomeputative serine-protein kinase3e-26116
NC_006582:883922:885764885764886246483Bacillus clausii KSM-K16, complete genomeserine-protein kinase RsbW7e-25112
NC_020410:495184:495510495510495992483Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeSerine-protein kinase rsbW2e-24111
NC_017188:461177:461503461503461985483Bacillus amyloliquefaciens TA208 chromosome, complete genomeserine-protein kinase RsbW2e-24111
NC_017191:467207:467533467533468015483Bacillus amyloliquefaciens XH7 chromosome, complete genomeserine-protein kinase RsbW2e-24111
NC_009725:496443:496769496769497251483Bacillus amyloliquefaciens FZB42, complete genomeRsbW1e-24111
NC_019842:484933:484933484933485415483Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,serine-protein kinase RsbW1e-24111
NC_018665:2563375:258357925835792584061483Exiguobacterium antarcticum B7 chromosome, complete genomeAnti-sigma regulatory factor, serine/threonine protein kinase4e-24110
NC_014551:483773:484099484099484581483Bacillus amyloliquefaciens DSM 7, complete genomeswitch protein/serine kinase and anti-sigma factor (inhibitory sigma-B binding protein)1e-23108
NC_017190:466236:466236466236466718483Bacillus amyloliquefaciens LL3 chromosome, complete genomeswitch protein/serine kinase and anti-sigma factor (inhibitory sigma-B binding protein)1e-23108
NC_004193:375416:655372655372655848477Oceanobacillus iheyensis HTE831, complete genomeserine-protein kinase RsbW1e-23108
NC_010556:2773396:279377327937732794255483Exiguobacterium sibiricum 255-15, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase8e-24108
NC_012673:2023297:202674620267462027225480Exiguobacterium sp. AT1b, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase2e-23107
NC_014479:509919:510245510245510727483Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeserine-protein kinase RsbW3e-23107
NC_014219:567033:568440568440568937498Bacillus selenitireducens MLS10 chromosome, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase5e-23106
NC_014976:2735423:273681827368182737300483Bacillus subtilis BSn5 chromosome, complete genomeserine-protein kinase RsbW4e-23106
NC_019896:3491000:351797535179753518457483Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeSigma B negative effector RsbW4e-23106
NC_016047:637778:639173639173639655483Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeanti-sigma B factor4e-23106
NC_000964:521975:521975521975522457483Bacillus subtilis subsp. subtilis str. 168, complete genomeserine-protein kinase RsbW4e-23106
NC_018704:347948:351804351804352277474Amphibacillus xylanus NBRC 15112, complete genomeanti-sigma B factor6e-2199.4
NC_012121:1578190:159459615945961595075480Staphylococcus carnosus subsp. carnosus TM300, complete genomeanti-sigmaB factor7e-1992.4
NC_009454:1246393:126502812650281265477450Pelotomaculum thermopropionicum SI, complete genomeanti-sigma F factor1e-1582
NC_014538:1311500:133335513333551333786432Thermoanaerobacter sp. X513 chromosome, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase1e-1375.1
NC_011898:426951:451644451644452030387Clostridium cellulolyticum H10, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase2e-1270.9
NC_009012:3421000:342532134253213425713393Clostridium thermocellum ATCC 27405, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase2e-1270.9
NC_007484:3358000:336376033637603364185426Nitrosococcus oceani ATCC 19707, complete genomeAnti-sigma regulatory factor (Ser/Thr protein kinase3e-1270.5
NC_014377:1227850:123596912359691236400432Thermosediminibacter oceani DSM 16646 chromosome, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase6e-1269.7
NC_013510:329999:345142345142345585444Thermomonospora curvata DSM 43183, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase2e-1167.8
NC_014315:3207684:321407132140713214496426Nitrosococcus watsoni C-113 chromosome, complete genomeputative anti-sigma regulatory factor2e-1167.8
NC_016048:2734563:275837427583742758820447Oscillibacter valericigenes Sjm18-20, complete genomeanti-sigma F factor1e-0961.6
NC_016593:2370000:239102423910242391464441Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeanti-sigma F factor2e-0961.2
NC_017195:2273216:229290722929072293347441Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeanti-sigma F factor3e-0960.5
NC_015589:3085442:308879730887973089243447Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeanti-sigma F factor1e-0858.5
NC_008578:591357:596738596738597154417Acidothermus cellulolyticus 11B, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase5e-0753.1
NC_013595:9149273:916488991648899165314426Streptosporangium roseum DSM 43021, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase3e-0650.8
NC_008255:4043045:405173540517354052136402Cytophaga hutchinsonii ATCC 33406, complete genomeanti-sigma regulatory factor4e-0650.4
NC_010814:2217153:224258522425852243016432Geobacter lovleyi SZ, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase1e-0548.9