Pre_GI: BLASTP Hits

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Query: NC_013316:1225797:1233448 Clostridium difficile R20291, complete genome

Start: 1233448, End: 1234005, Length: 558

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017179:1239991:124560912456091246166558Clostridium difficile BI1, complete genomefatty acid biosynthesis transcriptional regulator3e-102370
NC_013315:1230214:123583212358321236389558Clostridium difficile CD196 chromosome, complete genomefatty acid biosynthesis transcriptional regulator3e-102370
NC_018664:1699618:171563917156391716199561Clostridium acidurici 9a chromosome, complete genomefatty acid biosynthesis transcriptional regulator1e-45182
NC_014964:1309845:132302213230221323624603Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completefatty acid biosynthesis transcriptional regulator protein2e-45181
NC_015958:1422319:143484114348411435443603Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genometranscription factor fapR5e-45180
NC_014831:1140356:115421411542141155203990Thermaerobacter marianensis DSM 12885 chromosome, complete genomeregulatory protein DeoR4e-40164
NC_020134:1243122:125999812599981260642645Clostridium stercorarium subsp. stercorarium DSM 8532, completetranscription factor FapR3e-40164
NC_016627:2723678:272574527257452726389645Clostridium clariflavum DSM 19732 chromosome, complete genomesugar metabolism transcriptional regulator3e-40164
NC_014483:1954856:196606119660611966657597Paenibacillus polymyxa E681 chromosome, complete genomeTranscription factor fapR (Fatty acid and phospholipid biosynthesis regulator)2e-32138
NC_019978:1410041:142428514242851424866582Halobacteroides halobius DSM 5150, complete genomeuncharacterized protein, possibly involved in aromatic compounds catabolism5e-31133
NC_009848:1542978:154297815429781543544567Bacillus pumilus SAFR-032, complete genomefatty acid biosynthesis transcriptional regulator1e-30132
UCMB5137:1159520:116167211616721162238567Bacillus atrophaeus UCMB-5137fatty acid biosynthesis transcriptional regulator2e-30131
NC_004193:1558551:156591515659151566490576Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator of fatty acid biosynthesis2e-29128
NC_008600:3686135:369845736984573699209753Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator, DeoR family8e-29126
NC_005945:3636321:366965436696543670406753Bacillus anthracis str. Sterne, complete genometranscriptional regulator of fatty acid biosynthesis8e-29126
NC_003997:3617000:366895936689593669552594Bacillus anthracis str. Ames, complete genometranscriptional regulator of fatty acid biosynthesis8e-29126
NC_003909:3606177:364436036443603644953594Bacillus cereus ATCC 10987, complete genometranscriptional regulator of fatty acid biosynthesis8e-29126
NC_006274:3736703:374951737495173750269753Bacillus cereus E33L, complete genometranscriptional regulator of fatty acid biosynthesis8e-29126
NC_007530:3616828:366908636690863669679594Bacillus anthracis str. 'Ames Ancestor', complete genometranscriptional regulator of fatty acid biosynthesis8e-29126
NC_011658:3603009:365700936570093657602594Bacillus cereus AH187 chromosome, complete genomefatty acid biosynthesis transcriptional regulator8e-29126
NC_011773:3689473:370385037038503704443594Bacillus cereus AH820 chromosome, complete genomefatty acid biosynthesis transcriptional regulator8e-29126
NC_005957:3665657:369063336906333691385753Bacillus thuringiensis serovar konkukian str. 97-27, completetranscriptional regulator of fatty acid biosynthesis7e-29126
NC_017200:3701043:371336537133653713958594Bacillus thuringiensis serovar finitimus YBT-020 chromosome,fatty acid biosynthesis transcriptional regulator8e-29126
NC_016779:3621973:363429536342953634888594Bacillus cereus F837/76 chromosome, complete genomephosphate:acyl-ACP acyltransferase PlsX8e-29126
NC_016771:3599170:360950736095073610100594Bacillus cereus NC7401, complete genomehypothetical protein8e-29126
NC_012659:3617000:366898636689863669579594Bacillus anthracis str. A0248, complete genomefatty acid biosynthesis transcriptional regulator8e-29126
NC_012581:559182:569007569007569600594Bacillus anthracis str. CDC 684 chromosome, complete genomefatty acid biosynthesis transcriptional regulator8e-29126
NC_014103:4059905:406755740675574068120564Bacillus megaterium DSM319 chromosome, complete genometranscription factor FapR1e-28125
NC_012472:3705500:371646337164633717056594Bacillus cereus 03BB102, complete genomehypothetical protein2e-28125
NC_017208:3816753:386907538690753869668594Bacillus thuringiensis serovar chinensis CT-43 chromosome, completefatty acid biosynthesis transcriptional regulator2e-28125
NC_011772:3821917:383940038394003840062663Bacillus cereus G9842, complete genomehypothetical protein2e-28125
NC_010184:3713359:372773537277353728328594Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, DeoR family3e-28124
NC_011725:3862094:387368338736833874276594Bacillus cereus B4264 chromosome, complete genomefatty acid biosynthesis transcriptional regulator3e-28124
NC_014622:2114244:212551921255192126058540Paenibacillus polymyxa SC2 chromosome, complete genomefatty acid biosynthesis transcriptional regulating protein3e-27121
NC_020164:1590221:160884516088451609414570Staphylococcus warneri SG1, complete genomefatty acid biosynthesis transcriptional regulator4e-27120
NC_002973:1846000:186347018634701864039570Listeria monocytogenes str. 4b F2365, complete genometranscriptional regulator of fatty acid biosynthesis7e-27120
NC_010382:1607013:160920316092031609781579Lysinibacillus sphaericus C3-41, complete genometranscription factor fapR (Fatty acid and phospholipid biosynthesis regulator)2e-26118
NC_019903:2708500:272306827230682723637570Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,hypothetical protein7e-26116
NC_017353:1750971:176486317648631765432570Staphylococcus lugdunensis N920143, complete genometranscription factor fapr9e-24109
NC_013893:1723939:174147417414741742043570Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeTranscription factor fapR9e-24109
NC_012121:837586:849095849095849658564Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative transcription factor FapR1e-21102
NC_014335:3589726:361981536198153620306492Bacillus cereus biovar anthracis str. CI chromosome, completehypothetical protein3e-2098.2