Pre_GI: BLASTP Hits

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Query: NC_013316:1081044:1099964 Clostridium difficile R20291, complete genome

Start: 1099964, End: 1102183, Length: 2220

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009089:1202261:1221251122125112234702220Clostridium difficile 630, complete genomeputative helicase01425
NC_009488:1871912:1899064189906419012142151Orientia tsutsugamushi str. Boryong, complete genomeDNA helicase II, CAI276904e-21103
NC_009012:3354477:3399024339902434012492226Clostridium thermocellum ATCC 27405, complete genomeATP-dependent DNA helicase PcrA5e-21103
NC_017347:2017097:2027227202722720294192193Staphylococcus aureus subsp. aureus T0131 chromosome, completeATP-dependent DNA helicase, PcrA2e-20101
NC_014614:656000:6578816578816600432163Clostridium sticklandii, complete genomeATP-dependent DNA helicase8e-2099.4
NC_014376:1842290:1845537184553718478252289Clostridium saccharolyticum WM1 chromosome, complete genomeUvrD/REP helicase1e-1895.9
NC_014831:329983:3299833299833323582376Thermaerobacter marianensis DSM 12885 chromosome, complete genomeATP-dependent DNA helicase PcrA2e-1894.7
NC_007205:1:1382913829158652037Candidatus Pelagibacter ubique HTCC1062, complete genomeDNA helicase II2e-1895.1
NC_011901:625712:6616286616286636432016Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeATP-dependent DNA helicase Rep2e-1895.1
NC_015573:1671000:1688552168855216907562205Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeATP-dependent DNA helicase PcrA4e-1894
NC_010655:1160384:1160384116038411623902007Akkermansia muciniphila ATCC BAA-835, complete genomeUvrD/REP helicase5e-1893.6
NC_015660:3518931:3562042356204235642342193Geobacillus thermoglucosidasius C56-YS93 chromosome, completeATP-dependent DNA helicase PcrA7e-1893.2
NC_020829:5382500:5399636539963654016452010Pseudomonas denitrificans ATCC 13867, complete genomeATP-dependent DNA helicase Rep1e-1792
NC_007912:231817:2322972322972343152019Saccharophagus degradans 2-40, complete genomeATP-dependent DNA helicase Rep2e-1791.3
NC_012668:442601:4725634725634745782016Vibrio cholerae MJ-1236 chromosome 1, complete sequenceATP-dependent DNA helicase Rep2e-1791.7
NC_014218:1437931:1439939143993914424492511Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeUvrD/REP helicase3e-1790.9
NC_011297:1224749:1231122123112212329991878Dictyoglomus thermophilum H-6-12, complete genomeATP-dependent DNA helicase PcrA4e-1790.9
NC_011761:2785660:2785660278566027877892130Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeDNA helicase II4e-1790.5
NC_011206:2685499:2685499268549926876282130Acidithiobacillus ferrooxidans ATCC 53993, complete genomeUvrD/REP helicase4e-1790.5
NC_014973:243000:2582002582002603922193Geobacter sp. M18 chromosome, complete genomeUvrD/REP helicase4e-1790.5
NC_014098:2225174:2258626225862622608482223Bacillus tusciae DSM 2912 chromosome, complete genomeUvrD/REP helicase6e-1790.1
NC_014541:4167916:4183237418323741854022166Ferrimonas balearica DSM 9799 chromosome, complete genomeATP-dependent DNA helicase UvrD9e-1789.4
NC_018867:10238:5577655776576231848Dehalobacter sp. CF chromosome, complete genomeATP-dependent DNA helicase UvrD/PcrA1e-1689.4
NC_008060:3155133:3199939319993932020262088Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceUvrD/REP helicase2e-1688.6
NC_014408:806720:8331098331098358652757Methanothermobacter marburgensis str. Marburg chromosome, completeATP-dependent DNA helicase2e-1688.2
NC_009256:176403:1774401774401795272088Burkholderia vietnamiensis G4 chromosome 1, complete sequenceUvrD/REP helicase4e-1687
NC_006322:717953:7179537179537201722220Bacillus licheniformis ATCC 14580, complete genomePcrA6e-1686.7
NC_006270:718169:7181697181697203882220Bacillus licheniformis ATCC 14580, complete genomeATP-dependent DNA helicase6e-1686.7
NC_016944:168530:1942241942241963952172Vibrio cholerae IEC224 chromosome I, complete sequenceDNA-dependent helicase II8e-1686.3
NC_016445:2593800:2619482261948226216532172Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA-dependent helicase II8e-1686.3
NC_012668:442601:4426014426014447722172Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA-dependent helicase II8e-1686.3
NC_002505:168532:1942141942141963852172Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeDNA helicase II8e-1686.3
NC_009074:3791232:3815754381575438178412088Burkholderia pseudomallei 668 chromosome I, complete sequenceATP-dependent DNA helicase Rep2e-1585.5
NC_009076:3876733:3891166389116638932532088Burkholderia pseudomallei 1106a chromosome I, complete sequenceATP-dependent DNA helicase Rep2e-1585.5
NC_006350:3957454:3977437397743739795242088Burkholderia pseudomallei K96243 chromosome 1, complete sequenceATP-dependent DNA helicase Rep2e-1585.5
NC_006155:172313:1935641935641955852022Yersinia pseudotuberculosis IP 32953, complete genomeATP-dependent DNA helicase Rep8e-1582.8
NC_017080:1981788:1981788198178819841962409Phycisphaera mikurensis NBRC 102666, complete genomeATP-dependent DNA helicase PcrA8e-1582.8
NC_007645:713930:7350657350657372302166Hahella chejuensis KCTC 2396, complete genomeSuperfamily I DNA and RNA helicase8e-1582.8
NC_011035:933269:9352999352999373142016Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative ATP-dependent DNA helicase1e-1482
NC_017511:852260:8522608522608542752016Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative ATP-dependent DNA helicase1e-1482
NC_010634:166900:1881581881581901792022Yersinia pseudotuberculosis PB1/+, complete genomeATP-dependent DNA helicase Rep1e-1482.4
NC_013406:6494079:6494079649407964964092331Paenibacillus sp. Y412MC10 chromosome, complete genomeATP-dependent DNA helicase PcrA2e-1481.6
NC_008767:1363288:1380391138039113824632073Neisseria meningitidis FAM18, complete genomeATP-dependent DNA helicase2e-1481.6
NC_009483:1551040:1564229156422915662652037Geobacter uraniireducens Rf4 chromosome, complete genomeUvrD/REP helicase3e-1481.3
NC_008262:2433979:2461165246116524634202256Clostridium perfringens SM101, complete genomeATP-dependent DNA helicase PcrA4e-1480.9
NC_016599:3434996:3434996343499634373742379Owenweeksia hongkongensis DSM 17368 chromosome, complete genomeDNA/RNA helicase5e-1480.1
NC_018515:3169973:3177608317760831798482241Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeATP-dependent DNA helicase PcrA7e-1479.7
NC_018868:2867500:2882650288265028846712022Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeATP-dependent DNA helicase Rep1e-1379.3
NC_021171:358456:3625633625633647762214Bacillus sp. 1NLA3E, complete genomeATP-dependent DNA helicase1e-1379.3
NC_007434:111607:1258451258451280462202Burkholderia pseudomallei 1710b chromosome I, complete sequenceATP-dependent DNA helicase Rep1e-1379
NC_015499:1403447:1422710142271014245421833Thermodesulfobium narugense DSM 14796 chromosome, complete genomeUvrD/REP helicase2e-1378.2
NC_007651:3719191:3719191371919137217372547Burkholderia thailandensis E264 chromosome I, complete sequenceATP-dependent DNA helicase Rep2e-1378.2
NC_009441:4449500:4470831447083144731942364Flavobacterium johnsoniae UW101 chromosome, complete genomeUvrD/REP helicase2e-1378.2
NC_018419:226000:2279972279972301502154Secondary endosymbiont of Ctenarytaina eucalypti chromosome,ATP-dependent DNA helicase UvrD2e-1378.6
NC_014829:443500:4665374665374688192283Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeATP-dependent DNA helicase PcrA2e-1378.6
NC_015696:610000:6267886267886290162229Francisella sp. TX077308 chromosome, complete genomeATP-dependent DNA helicase UvrD/PcrA4e-1377
NC_018012:3102215:3126846312684631290172172Thiocystis violascens DSM 198 chromosome, complete genomeDNA/RNA helicase5e-1376.6
NC_009801:3374501:3383223338322333851151893Escherichia coli E24377A, complete genomehelicase, UvrD family5e-1377
NC_009615:1067603:1087220108722010895622343Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase5e-1377
NC_011661:1411383:1411383141138314132601878Dictyoglomus turgidum DSM 6724, complete genomeUvrD/REP helicase5e-1377
NC_010981:1053533:1058198105819810601111914Wolbachia pipientis, complete genomehelicase II, UvrD9e-1376.3
NC_002978:918000:9223779223779242931917Wolbachia endosymbiont of Drosophila melanogaster, complete genomehelicase II - UvrD/PcrA1e-1275.5
NC_019978:2293327:2307011230701123091222112Halobacteroides halobius DSM 5150, complete genomeATP-dependent DNA helicase PcrA2e-1275.1
NC_010718:3039434:3039434303943430416982265Natranaerobius thermophilus JW/NM-WN-LF, complete genomeUvrD/REP helicase2e-1274.7
NC_012416:979484:9824839824839843991917Wolbachia sp. wRi, complete genomeDNA helicase II2e-1274.7
NC_003919:5056650:5056650505665050586261977Xanthomonas axonopodis pv. citri str. 306, complete genomeATP-dependent DNA helicase3e-1274.3
NC_014803:709000:7160817160817179971917Pseudoalteromonas sp. SM9913 chromosome chromosome I, completeUvrD family helicase3e-1274.7
NC_007929:1397989:1403083140308314053172235Lactobacillus salivarius subsp. salivarius UCC118, complete genomeATP-dependent DNA helicase3e-1274.7
NC_006833:806467:8171338171338190491917Wolbachia endosymbiont strain TRS of Brugia malayi, completeSuperfamily I DNA and RNA helicase, UvrD4e-1273.9
NC_012438:192065:1930181930181951202103Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeATP-dependent DNA helicase PcrA5e-1273.6
NC_002488:45219:4680546805489912187Xylella fastidiosa 9a5c, complete genomeDNA helicase II1e-1172
NC_015556:130437:1304371304371326382202Pseudomonas fulva 12-X chromosome, complete genomeUvrD/REP helicase2e-1171.2
NC_017200:345502:3455023455023477512250Bacillus thuringiensis serovar finitimus YBT-020 chromosome,ATP-dependent DNA helicase PcrA2e-1171.2
NC_016779:312500:3133533133533156142262Bacillus cereus F837/76 chromosome, complete genomeATP-dependent DNA helicase UvrD/PcrA3e-1171.2
NC_010278:1467146:1468739146873914709372199Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,DNA-dependent helicase II3e-1170.9
NC_010513:44886:4643546435486062172Xylella fastidiosa M12 chromosome, complete genomeDNA-dependent helicase II4e-1170.5
NC_007519:3527207:3527207352720735293662160Desulfovibrio alaskensis G20 chromosome, complete genomeATP-dependent DNA helicase UvrD1e-1069.3
NC_017190:2130651:2212720221272022145161797Bacillus amyloliquefaciens LL3 chromosome, complete genomeUvrD/REP helicase1e-1068.9
NC_009092:1441813:1461981146198114640172037Shewanella loihica PV-4, complete genomeUvrD/REP helicase2e-1068.6
NC_017191:1173989:1244946124494612467421797Bacillus amyloliquefaciens XH7 chromosome, complete genomeUvrD/REP helicase4e-1067.4
NC_017188:1172181:1243369124336912451651797Bacillus amyloliquefaciens TA208 chromosome, complete genomeATP-dependent DNA helicase, uvrD-like protein4e-1067.4
NC_014924:3065430:3065430306543030676102181Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeDNA helicase II4e-1067.4
NC_015676:109743:1250711250711278602790Methanosalsum zhilinae DSM 4017 chromosome, complete genomeUvrD/REP helicase4e-1067
NC_007347:3612918:3635779363577936378932115Ralstonia eutropha JMP134 chromosome 1, complete sequenceUvrD/REP helicase5e-1067
NC_015067:1528984:1554473155447315585884116Bifidobacterium longum subsp. longum JCM 1217, complete genomeATP-dependent nuclease subunit A1e-0965.5
NC_014970:928240:9282409282409301591920Mycoplasma haemofelis str. Langford 1, complete genomeATP-dependent DNA helicase UvrD/PcrA1e-0965.5
NC_014974:1539950:1545650154565015475151866Thermus scotoductus SA-01 chromosome, complete genomeATP-dependent DNA helicase PcrA2e-0964.7
NC_009484:857384:8840898840898860081920Acidiphilium cryptum JF-5 chromosome, complete genomeUvrD/REP helicase9e-0962.8
NC_021184:1484352:1504552150455215064291878Desulfotomaculum gibsoniae DSM 7213, complete genomeDNA/RNA helicase, superfamily I1e-0862.4
NC_004557:691944:7134697134697156312163Clostridium tetani E88, complete genomeDNA helicase II1e-0862.4
NC_014752:197000:2004822004822026892208Neisseria lactamica ST-640, complete genomeDNA helicase II1e-0862.4
NC_016012:16134:1613416134197183585Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeATP-dependent deoxyribonuclease chain A1e-0862.4
NC_015519:2045935:2048474204847420513862913Tepidanaerobacter sp. Re1 chromosome, complete genomeUvrD/REP helicase3e-0861.2
NC_009975:1712577:1739721173972117425612841Methanococcus maripaludis C6, complete genomeUvrD/REP helicase4e-0860.8
NC_020210:2133996:2174276217427621763362061Geobacillus sp. GHH01, complete genomeDNA/RNA helicase5e-0860.5
NC_017062:547317:5481925481925501561965Rickettsia typhi str. B9991CWPP chromosome, complete genomeDNA helicase II7e-0860.1
NC_013204:1135397:1155067115506711575082442Eggerthella lenta DSM 2243, complete genomeUvrD/REP helicase1e-0759.3
NC_010003:795355:8349168349168370362121Petrotoga mobilis SJ95, complete genomeUvrD/REP helicase4e-0757.4
NC_013223:2279869:2304961230496123071052145Desulfohalobium retbaense DSM 5692, complete genomeUvrD/REP helicase6e-0757
NC_003901:25500:3053030530331272598Methanosarcina mazei Go1, complete genomesuperfamily I DNA/RNA helicase1e-0655.8
NC_015977:2807782:2831058283105828339462889Roseburia hominis A2-183 chromosome, complete genomeSuperfamily I helicase domain and RecB family exonuclease domain containing protein1e-0655.8
NC_013037:1072266:1085163108516310879612799Dyadobacter fermentans DSM 18053, complete genomeUvrD/REP helicase2e-0655.1
NC_014720:4170:2938329383316532271Caldicellulosiruptor kronotskyensis 2002 chromosome, completeuvrd/rep helicase3e-0654.3