Pre_GI: BLASTP Hits

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Query: NC_013316:1081044:1092897 Clostridium difficile R20291, complete genome

Start: 1092897, End: 1093013, Length: 117

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009089:117980:136133136133136249117Clostridium difficile 630, complete genome5S ribosomal RNA2e-1478.2
NC_013316:1:156101561015726117Clostridium difficile R20291, complete genome5S ribosomal RNA2e-1478.2
NC_009089:1202261:121417812141781214294117Clostridium difficile 630, complete genome5S ribosomal RNA2e-1478.2
NC_013316:3863728:386967038696703869786117Clostridium difficile R20291, complete genome5S ribosomal RNA2e-1478.2
NC_009089:3998347:400428940042894004405117Clostridium difficile 630, complete genome5S ribosomal RNA2e-1478.2
NC_013316:120759:147586147586147702117Clostridium difficile R20291, complete genome5S ribosomal RNA2e-1478.2
NC_009089:1:158481584815964117Clostridium difficile 630, complete genome5S ribosomal RNA2e-1478.2
NC_009089:370555:382092382092382208117Clostridium difficile 630, complete genome5S ribosomal RNA2e-1478.2
NC_009089:4140764:414694541469454147061117Clostridium difficile 630, complete genome5S ribosomal RNA2e-1478.2
NC_009089:117980:152077152077152193117Clostridium difficile 630, complete genome5S ribosomal RNA2e-1478.2
NC_013316:4018451:402535940253594025475117Clostridium difficile R20291, complete genome5S ribosomal RNA2e-1478.2
NC_013316:120759:137938137938138054117Clostridium difficile R20291, complete genome5S ribosomal RNA2e-1478.2
NC_013316:371953:383489383489383605117Clostridium difficile R20291, complete genome5S ribosomal RNA2e-1478.2
NC_013316:1:298992989930015117Clostridium difficile R20291, complete genome5S ribosomal RNA1e-1375.1
NC_009089:1:301143011430230117Clostridium difficile 630, complete genome5S ribosomal RNA1e-1375.1
NC_009089:117980:146757146757146873117Clostridium difficile 630, complete genome5S ribosomal RNA1e-1375.1
NC_009089:117980:129192129192129308117Clostridium difficile 630, complete genome5S ribosomal RNA1e-1271.6
NC_020304:2107979:213322421332242133340117Desulfocapsa sulfexigens DSM 10523, complete genome5S ribosomal RNA3e-0753.9
NC_016627:2593242:260146126014612601577117Clostridium clariflavum DSM 19732 chromosome, complete genome5S ribosomal RNA7e-0752.8
NC_016627:3815690:382390438239043824020117Clostridium clariflavum DSM 19732 chromosome, complete genome5S ribosomal RNA7e-0752.8
NC_016627:4490435:450492045049204505036117Clostridium clariflavum DSM 19732 chromosome, complete genome5S ribosomal RNA7e-0752.8
NC_016627:4490435:451242045124204512536117Clostridium clariflavum DSM 19732 chromosome, complete genome5S ribosomal RNA7e-0752.8
NC_016627:4871875:488069248806924880808117Clostridium clariflavum DSM 19732 chromosome, complete genome5S ribosomal RNA7e-0752.8
NC_014972:2659388:267110126711012671217117Desulfobulbus propionicus DSM 2032 chromosome, complete genome5S ribosomal RNA9e-0752.4
NC_014972:2980974:299203729920372992153117Desulfobulbus propionicus DSM 2032 chromosome, complete genome5S ribosomal RNA9e-0752.4
NC_011567:388358:405192405192405305114Anoxybacillus flavithermus WK1, complete genome5S ribosomal RNA9e-0752.4
NC_011567:238249:251076251076251189114Anoxybacillus flavithermus WK1, complete genome5S ribosomal RNA1e-0652
NC_011567:2327870:234009423400942340207114Anoxybacillus flavithermus WK1, complete genome5S ribosomal RNA1e-0652
NC_011567:139598:149588149588149701114Anoxybacillus flavithermus WK1, complete genome5S ribosomal RNA1e-0652
NC_011567:204772:219109219109219222114Anoxybacillus flavithermus WK1, complete genome5S ribosomal RNA1e-0652
NC_011567:75306:886548865488767114Anoxybacillus flavithermus WK1, complete genome5S ribosomal RNA1e-0652
NC_011567:1:341853418534298114Anoxybacillus flavithermus WK1, complete genome5S ribosomal RNA1e-0652
NC_011567:1:157571575715870114Anoxybacillus flavithermus WK1, complete genome5S ribosomal RNA1e-0652
NC_016627:3881000:388695238869523887068117Clostridium clariflavum DSM 19732 chromosome, complete genome5S ribosomal RNA1e-0651.6
NC_007576:1747662:175908417590841759200117Lactobacillus sakei subsp. sakei 23K, complete genome5S ribosomal RNA3e-0650.4
NC_007576:1564739:157222615722261572342117Lactobacillus sakei subsp. sakei 23K, complete genome5S ribosomal RNA3e-0650.4
NC_007576:1854136:186913018691301869246117Lactobacillus sakei subsp. sakei 23K, complete genome5S ribosomal RNA3e-0650.4
NC_007576:299266:310982310982311098117Lactobacillus sakei subsp. sakei 23K, complete genome5S ribosomal RNA3e-0650.4
NC_007576:435713:450340450340450456117Lactobacillus sakei subsp. sakei 23K, complete genome5S ribosomal RNA3e-0650.4
NC_007576:1854136:186371318637131863829117Lactobacillus sakei subsp. sakei 23K, complete genome5S ribosomal RNA3e-0650.4
NC_008593:2527064:253346325334632533579117Clostridium novyi NT, complete genome5S ribosomal RNA5e-0650.1
NC_008593:2457594:246476924647692464885117Clostridium novyi NT, complete genome5S ribosomal RNA5e-0650.1
NC_015520:330500:337844337844337960117Mahella australiensis 50-1 BON chromosome, complete genome5S ribosomal RNA8e-0649.3
NC_007759:723675:743084743084743204121Syntrophus aciditrophicus SB, complete genome5S RNA8e-0649.3