Pre_GI: BLASTN Hits

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Query: NC_013315:3689422 Clostridium difficile CD196 chromosome, complete genome

Start: 3689422, End: 3713373, Length: 23952

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021182:16549031654903167678221880Clostridium pasteurianum BC1, complete genome2e-56228BLASTN svgBLASTP svg
NC_018643:482676*48267650224119566Alpha proteobacterium HIMB5 chromosome, complete genome1e-48202BLASTN svgBLASTP svg
NC_019970:81391781391783706923153Thermoanaerobacterium thermosaccharolyticum M0795, complete genome3e-34155BLASTN svgBLASTP svg
NC_014328:77309577309579175318659Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_011661:1100576*1100576112031619741Dictyoglomus turgidum DSM 6724, complete genome2e-25125BLASTN svgBLASTP svg
NC_012440:1215838*1215838124846532628Persephonella marina EX-H1, complete genome1e-23119BLASTN svgBLASTP svg
NC_004722:4405363*4405363443759932237Bacillus cereus ATCC 14579, complete genome1e-20109BLASTN svgBLASTP svg
NC_015391:1323171*1323171134609922929Carnobacterium sp. 17-4 chromosome, complete genome8e-19103BLASTN svgBLASTP svg
NC_014335:4181710*4181710422264840939Bacillus cereus biovar anthracis str. CI chromosome, complete3e-18101BLASTN svgBLASTP svg
NC_009012:3224000*3224000324268718688Clostridium thermocellum ATCC 27405, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007205:841818*84181886460622789Candidatus Pelagibacter ubique HTCC1062, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_010003:1577934*1577934159579517862Petrotoga mobilis SJ95, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013517:2437574*2437574248761650043Sebaldella termitidis ATCC 33386, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014829:3772914*3772914379159918686Bacillus cellulosilyticus DSM 2522 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012472:4255729*4255729429630140573Bacillus cereus 03BB102, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_003997:4273579*4273579429175418176Bacillus anthracis str. Ames, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002528:50595150595153093624986Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete8e-1383.8BLASTN svgBLASTP svg
NC_014499:87528*8752810905021523Candidatus Sulcia muelleri CARI chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014166:716000*71600073847222473Arcobacter nitrofigilis DSM 7299 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_019970:8938*89382966920732Thermoanaerobacterium thermosaccharolyticum M0795, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014410:8694*86942877520082Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,2e-1075.8BLASTN svgBLASTP svg
NC_010723:420025*42002544661626592Clostridium botulinum E3 str. Alaska E43, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010674:426256*42625645229426039Clostridium botulinum B str. Eklund 17B, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003909:4831000*4831000485077119772Bacillus cereus ATCC 10987, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008600:4868000*4868000488698318984Bacillus thuringiensis str. Al Hakam, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012225:25232622523262254758024319Brachyspira hyodysenteriae WA1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015682:736746*73674676603529290Thermodesulfobacterium sp. OPB45 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007350:1971762*1971762199495223191Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,3e-0971.9BLASTN svgBLASTP svg
NC_006055:456711*45671148395927249Mesoplasma florum L1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008600:4263505*4263505428734423840Bacillus thuringiensis str. Al Hakam, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011772:4397599*4397599441737119773Bacillus cereus G9842, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014330:1957725*1957725197782020096Brachyspira pilosicoli 95/1000 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018664:1729794*1729794175215622363Clostridium acidurici 9a chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019908:1296870*1296870131523618367Brachyspira pilosicoli P43/6/78 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_021182:43109004310900433018019281Clostridium pasteurianum BC1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015555:447844782276918292Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_019978:2036779*2036779205929022512Halobacteroides halobius DSM 5150, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007530:4853740*4853740487494821209Bacillus anthracis str. 'Ames Ancestor', complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005945:4854951*4854951487414219192Bacillus anthracis str. Sterne, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003997:4852332*4852332487482222491Bacillus anthracis str. Ames, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010001:47335447335449159918246Clostridium phytofermentans ISDg, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011565:77792977792980201724089Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,7e-0763.9BLASTN svgBLASTP svg
NC_014393:34948633494863351847923617Clostridium cellulovorans 743B chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014328:1596016*1596016161409918084Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014150:1006000*1006000102850522506Brachyspira murdochii DSM 12563 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003909:4209385*4209385423241623032Bacillus cereus ATCC 10987, complete genome3e-0661.9BLASTN svgBLASTP svg