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Query: NC_013315:2232339 Clostridium difficile CD196 chromosome, complete genome

Start: 2232339, End: 2251220, Length: 18882

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013316:23096942309694233224722554Clostridium difficile R20291, complete genome011680BLASTN svgBLASTP svg
NC_010674:61596361596363966223700Clostridium botulinum B str. Eklund 17B, complete genome7e-22113BLASTN svgBLASTP svg
NC_010723:57525457525460199426741Clostridium botulinum E3 str. Alaska E43, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_021182:40112940112942526224134Clostridium pasteurianum BC1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_012225:47800478008109933300Brachyspira hyodysenteriae WA1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014330:76823276823281309944868Brachyspira pilosicoli 95/1000 chromosome, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_018604:22535392253539227800524467Brachyspira pilosicoli WesB complete genome6e-1383.8BLASTN svgBLASTP svg
NC_019908:24015772401577244617744601Brachyspira pilosicoli P43/6/78 chromosome, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_021182:43435143435145489320543Clostridium pasteurianum BC1, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_014328:3294086*3294086331239118306Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_020291:795500*79550085457259073Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0971.9BLASTN svgBLASTP svg