Pre_GI: BLASTP Hits

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Query: NC_013315:2531019:2564107 Clostridium difficile CD196 chromosome, complete genome

Start: 2564107, End: 2565192, Length: 1086

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017179:2539031:2572119257211925732041086Clostridium difficile BI1, complete genomepermease0660
NC_010520:3526883:3538028353802835391191092Clostridium botulinum A3 str. Loch Maree, complete genomeputative permease5e-100364
NC_008554:4781500:4799624479962448007151092Syntrophobacter fumaroxidans MPOB, complete genomepermease5e-95348
NC_017297:3546467:355345835534583553997540Clostridium botulinum F str. 230613 chromosome, complete genome5e-48192
NC_014910:2779573:2792730279273027937851056Alicycliphilus denitrificans BC chromosome, complete genomepermease2e-21103
NC_007519:2773000:2779428277942827805191092Desulfovibrio alaskensis G20 chromosome, complete genomepermease-like protein4e-1995.9
NC_002163:1471517:149032814903281491152825Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomehypothetical protein4e-1995.9
NC_003912:1629937:162993716299371630884948Campylobacter jejuni RM1221, complete genomepermease, putative7e-1995.1
NC_017281:1533454:153345415334541534401948Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomemembrane protein7e-1995.1
NC_014166:1809052:1822528182252818236521125Arcobacter nitrofigilis DSM 7299 chromosome, complete genomepermease2e-1893.6
NC_008781:2981868:2986274298627429873201047Polaromonas naphthalenivorans CJ2, complete genomepermease3e-1892.8
NC_010730:952574:970233970233971192960Sulfurihydrogenibium sp. YO3AOP1, complete genomepermease1e-1791.3
NC_019962:1909103:196271919627191963675957Natrinema pellirubrum DSM 15624, complete genomeputative permease3e-1789.7
NC_014972:1407632:1416751141675114178451095Desulfobulbus propionicus DSM 2032 chromosome, complete genomepermease5e-1789
NC_015152:1230995:1246285124628512472891005Spirochaeta sp. Buddy chromosome, complete genomehypothetical protein2e-1687
NC_009714:292470:303208303208304203996Campylobacter hominis ATCC BAA-381, complete genomepermease4e-1685.9
NC_015417:39633:479664796648928963Clostridium botulinum BKT015925 plasmid p1BKT015925, completepermease2e-1583.6
NC_009486:1737703:1745017174501717461051089Thermotoga petrophila RKU-1 chromosome, complete genomepermease3e-1582.8
NC_017059:2771085:279943327994332800398966Rhodospirillum photometricum DSM 122, complete genomePermease2e-1480.5
NC_010816:1274702:1283050128305012840631014Bifidobacterium longum DJO10A, complete genomeHypothetical permease4e-1479.3
NC_014151:4021394:4043941404394140449901050Cellulomonas flavigena DSM 20109 chromosome, complete genomepermease4e-1479.3
NC_011830:1288984:1316848131684813178521005Desulfitobacterium hafniense DCB-2, complete genomepermease6e-1478.6
NC_015850:548821:570653570653571606954Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein9e-1478.2
NC_020389:714178:7323407323407333921053Methanosarcina mazei Tuc01, complete genomeTransporter1e-1377.4
NC_011979:3880488:388504938850493885729681Geobacter sp. FRC-32, complete genome4e-1375.9
NC_013939:1688400:1705751170575117069201170Deferribacter desulfuricans SSM1, complete genomehypothetical protein4e-1375.9
NC_018012:1789028:1802946180294618039921047Thiocystis violascens DSM 198 chromosome, complete genomeputative permease8e-1375.1
NC_014218:1689002:1689002168900216901801179Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomepermease1e-1274.3
NC_017192:276187:299253299253300215963Arcobacter sp. L, complete genomehypothetical protein5e-1272.4
NC_008554:4699577:471204947120494712951903Syntrophobacter fumaroxidans MPOB, complete genomepermease6e-1272
NC_009092:521519:5435185435185445341017Shewanella loihica PV-4, complete genomepermease1e-1170.9
NC_009975:688667:688667688667689623957Methanococcus maripaludis C6, complete genomepermease2e-1170.5
NC_009634:349204:351034351034351894861Methanococcus vannielii SB chromosome, complete genomepermease8e-1168.2
NC_007907:5297477:5309204530920453102081005Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1066.2
NC_014377:1985714:1990121199012119912931173Thermosediminibacter oceani DSM 16646 chromosome, complete genomepermease6e-1065.5
NC_016791:2215164:221516422151642216060897Clostridium sp. BNL1100 chromosome, complete genomeputative permease6e-1065.5
NC_011899:2165814:2165814216581421669951182Halothermothrix orenii H 168, complete genomepermease5e-1065.5
NC_014330:313813:3138133138133148171005Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative permease2e-0963.9
NC_018604:1137797:1156011115601111570151005Brachyspira pilosicoli WesB complete genomeputative permease2e-0963.9
NC_018607:1648607:1650167165016716511711005Brachyspira pilosicoli B2904 chromosome, complete genomepermease7e-0962
NC_014376:2964731:2972321297232129733341014Clostridium saccharolyticum WM1 chromosome, complete genomepermease1e-0861.2
NC_013522:1538994:1542512154251215436811170Thermanaerovibrio acidaminovorans DSM 6589, complete genomepermease4e-0859.3
NC_008787:1463696:146524714652471465888642Campylobacter jejuni subsp. jejuni 81-176, complete genomehypothetical protein7e-0858.5
NC_017328:3655876:366286236628623663824963Shigella flexneri 2002017 chromosome, complete genomeputative membrane transport protein2e-0757
CP002185:3822470:3846689384668938476901002Escherichia coli W, complete genomeconserved hypothetical protein4e-0756.2
NC_009801:3956917:3962721396272139637221002Escherichia coli E24377A, complete genomeputative permease4e-0756.2
CP002516:246767:2583832583832593841002Escherichia coli KO11, complete genomepermease4e-0756.2
AP010958:4313462:4318121431812143191221002Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein4e-0756.2
NC_013353:4313462:4318121431812143191221002Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein4e-0756.2
NC_016902:246767:2583832583832593841002Escherichia coli KO11FL chromosome, complete genomepermease4e-0756.2
NC_004337:3590323:362801236280123628968957Shigella flexneri 2a str. 301, complete genomehypothetical protein4e-0755.8
NC_004337:3621985:362801236280123628968957Shigella flexneri 2a str. 301, complete genomehypothetical protein4e-0755.8
NC_004741:4132056:414488041448804145836957Shigella flexneri 2a str. 2457T, complete genomehypothetical protein4e-0755.8
NC_008258:3581583:358826735882673589229963Shigella flexneri 5 str. 8401, complete genomehypothetical protein4e-0755.8
NC_011415:3887997:3896056389605638970571002Escherichia coli SE11 chromosome, complete genomehypothetical protein4e-0755.8
NC_013361:4566779:4571679457167945726801002Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein4e-0755.8
NC_013364:4306000:430912843091284310090963Escherichia coli O111:H- str. 11128, complete genomehypothetical protein4e-0755.8
NC_014972:1407632:1420718142071814220191302Desulfobulbus propionicus DSM 2032 chromosome, complete genomepermease8e-0755.1
NC_020995:2636519:265148326514832652430948Enterococcus casseliflavus EC20, complete genomeABC transporter membrane protein2e-0653.9
NC_011741:3709081:3714883371488337158961014Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-0653.9
CU928160:3709081:3714883371488337158961014Escherichia coli IAI1 chromosome, complete genomeputative membrane protein2e-0653.9
NC_002937:1706000:1723708172370817248231116Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completepermease, putative3e-0653.5
NC_014002:809816:8306588306588317011044Methanohalophilus mahii DSM 5219 chromosome, complete genomepermease2e-0653.5
NC_008751:1736512:1743434174343417445491116Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomepermease3e-0653.1
NC_011748:3983432:4015995401599540170201026Escherichia coli 55989, complete genomehypothetical protein3e-0652.8
CU928145:3983432:4015995401599540170201026Escherichia coli 55989 chromosome, complete genomeputative membrane protein3e-0652.8
NC_015732:982774:9934789934789947491272Spirochaeta caldaria DSM 7334 chromosome, complete genomehypothetical protein5e-0652.4
NC_010498:3838419:3862537386253738635381002Escherichia coli SMS-3-5, complete genomeputative permease5e-0652.4
NC_007907:5185510:5229711522971152307421032Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-0652
NC_021064:31816:367193671937651933Propionibacterium avidum 44067, complete genomehypothetical protein8e-0651.6