Pre_GI: BLASTP Hits

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Query: NC_013315:2531019:2554050 Clostridium difficile CD196 chromosome, complete genome

Start: 2554050, End: 2554367, Length: 318

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017179:2539031:256206225620622562379318Clostridium difficile BI1, complete genomethioredoxin5e-56215
NC_013316:2623199:263460626346062634923318Clostridium difficile R20291, complete genomethioredoxin5e-56215
NC_014614:1259236:126330412633041263621318Clostridium sticklandii, complete genomeThioredoxin (Trx)1e-40164
NC_010520:1427981:143821914382191438539321Clostridium botulinum A3 str. Loch Maree, complete genomethioredoxin family protein9e-36148
NC_009699:1400000:140949814094981409818321Clostridium botulinum F str. Langeland chromosome, complete genomethioredoxin family protein3e-35147
NC_010516:1382000:139169013916901392010321Clostridium botulinum B1 str. Okra, complete genomethioredoxin family protein2e-35147
NC_014328:3066628:307372330737233074046324Clostridium ljungdahlii ATCC 49587 chromosome, complete genomethioredoxin2e-35147
NC_016584:2244966:225197422519742252291318Desulfosporosinus orientis DSM 765 chromosome, complete genomethioredoxin domain-containing protein2e-35147
NC_012563:1464000:147377614737761474096321Clostridium botulinum A2 str. Kyoto, complete genomethioredoxin family protein4e-35146
NC_009495:1368000:137598013759801376300321Clostridium botulinum A str. ATCC 3502 chromosome, complete genomethioredoxin family protein4e-35146
NC_009697:1336889:134460013446001344920321Clostridium botulinum A str. ATCC 19397 chromosome, completethioredoxin family protein4e-35146
NC_009698:1337383:134509413450941345414321Clostridium botulinum A str. Hall chromosome, complete genomethioredoxin family protein4e-35146
NC_017297:1402349:140979014097901410119330Clostridium botulinum F str. 230613 chromosome, complete genomethioredoxin family protein3e-32136
NC_014328:2990790:301930630193063019629324Clostridium ljungdahlii ATCC 49587 chromosome, complete genomethioredoxin6e-32135
NC_010718:497222:499986499986500303318Natranaerobius thermophilus JW/NM-WN-LF, complete genomeThioredoxin domain4e-28123
NC_014150:3139852:315535731553573155674318Brachyspira murdochii DSM 12563 chromosome, complete genomeThioredoxin domain protein4e-28123
NC_019978:2189394:219591521959152196232318Halobacteroides halobius DSM 5150, complete genomethioredoxin domain-containing protein2e-24110
NC_014210:5752651:576142057614205761743324Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,thioredoxin4e-1683.2
NC_015681:1201926:121996412199641220287324Thermodesulfatator indicus DSM 15286 chromosome, complete genomethioredoxin1e-1582
NC_020409:329915:338253338253338573321Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeThioredoxin-11e-1375.1
NC_011899:1926000:193431819343181934638321Halothermothrix orenii H 168, complete genomethioredoxin2e-1374.3
NC_010475:1671823:169399816939981694321324Synechococcus sp. PCC 7002, complete genomethioredoxin1e-1271.6
NC_009850:1862602:188315818831581883475318Arcobacter butzleri RM4018, complete genomethioredoxin2e-1271.6
NC_007644:1694879:171051817105181710847330Moorella thermoacetica ATCC 39073, complete genomethioredoxin2e-1271.2
NC_007164:2446879:245284724528472453170324Corynebacterium jeikeium K411, complete genomethioredoxin2e-1270.9
NC_008820:808886:826442826442826765324Prochlorococcus marinus str. MIT 9303, complete genomeThioredoxin2e-1270.9
NC_015590:298063:306845306845307213369Sinorhizobium meliloti AK83 chromosome 1, complete sequencethioredoxin domain-containing protein3e-1270.5
NC_014654:422013:440049440049440369321Halanaerobium sp. 'sapolanicus' chromosome, complete genomethioredoxin3e-1270.5
NC_015573:1979202:199762919976291997946318Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomethioredoxin4e-1270.1
NC_008578:2431074:243217524321752432501327Acidothermus cellulolyticus 11B, complete genomethioredoxin6e-1269.7
NC_017325:1488841:149519514951951495557363Sinorhizobium meliloti SM11 chromosome, complete genomeputative thioredoxin protein5e-1269.7
NC_017325:1897500:190355219035521903914363Sinorhizobium meliloti SM11 chromosome, complete genomeputative thioredoxin protein5e-1269.7
NC_011126:555483:555160555160555486327Hydrogenobaculum sp. Y04AAS1, complete genomethioredoxin7e-1269.3
NC_014151:4021394:403812340381234038446324Cellulomonas flavigena DSM 20109 chromosome, complete genomethioredoxin8e-1268.9
NC_018515:989616:993165993165993494330Desulfosporosinus meridiei DSM 13257 chromosome, complete genomethioredoxin9e-1268.9
NC_013929:5135285:514916551491655149497333Streptomyces scabiei 87.22 chromosome, complete genomethioredoxin1e-1168.6
NC_015499:1403447:141993914199391420250312Thermodesulfobium narugense DSM 14796 chromosome, complete genomethioredoxin1e-1168.6
NC_015556:515641:536731536731537057327Pseudomonas fulva 12-X chromosome, complete genomethioredoxin1e-1168.6
NC_015953:3684065:370046137004613700793333Streptomyces sp. SirexAA-E chromosome, complete genomethioredoxin2e-1167.8
NC_004557:2711702:271263827126382712955318Clostridium tetani E88, complete genomethioredoxin3e-1167.4
NC_003888:4251867:428021242802124280544333Streptomyces coelicolor A3(2), complete genomethioredoxin3e-1167.4
NC_007626:4688777:469237346923734692729357Magnetospirillum magneticum AMB-1, complete genomeThiol-disulfide isomerase and thioredoxins3e-1167
NC_013173:1231213:124439012443901244710321Desulfomicrobium baculatum DSM 4028, complete genomethioredoxin4e-1167
NC_009464:1804791:182493318249331825274342Uncultured methanogenic archaeon RC-I, complete genomethioredoxin5e-1166.6
NC_014973:4630132:466032346603234660652330Geobacter sp. M18 chromosome, complete genomethioredoxin5e-1166.2
NC_004842:62000:774197741977766348Anaplasma marginale str. St. Maries, complete genomethioredoxin7e-1165.9
NC_012026:75812:768167681677163348Anaplasma marginale str. Florida, complete genomethioredoxin (trxA)9e-1165.5
NC_011026:2269986:227686222768622277188327Chloroherpeton thalassium ATCC 35110, complete genomethioredoxin1e-1065.5
NC_007333:3626510:363557936355793635902324Thermobifida fusca YX, complete genomethioredoxin1e-1065.1
NC_013501:176073:194886194886195233348Rhodothermus marinus DSM 4252, complete genomethioredoxin1e-1065.1
NC_008702:1094663:110816211081621108488327Azoarcus sp. BH72, complete genomethioredoxin-disulfide reductase2e-1064.7
NC_014151:4106624:410959241095924109924333Cellulomonas flavigena DSM 20109 chromosome, complete genomethioredoxin2e-1064.3
NC_017093:8757291:875826787582678758584318Actinoplanes missouriensis 431, complete genomeputative thioredoxin2e-1064.3
NC_007354:1087456:110654311065431106875333Ehrlichia canis str. Jake, complete genomeThioredoxin2e-1064.3
NC_015222:1607757:163141016314101631736327Nitrosomonas sp. AL212 chromosome, complete genomethioredoxin3e-1063.9
NC_020291:5752099:576770257677025768010309Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomethioredoxin TrxA3e-1063.9
NC_014540:2908912:2920031292003129212571227Burkholderia sp. CCGE1003 chromosome 2, complete sequencethioredoxin3e-1063.9
NC_010723:3133302:314867031486703148981312Clostridium botulinum E3 str. Alaska E43, complete genomethioredoxin3e-1063.9
NC_011830:3786173:380730038073003807629330Desulfitobacterium hafniense DCB-2, complete genomethioredoxin3e-1063.9
NC_016114:3655005:367608836760883676423336Streptomyces flavogriseus ATCC 33331 chromosome, complete genomethioredoxin3e-1063.9
NC_009925:4864367:487975748797574880080324Acaryochloris marina MBIC11017, complete genomethioredoxin3e-1063.5
NC_014221:169996:174418174418174750333Truepera radiovictrix DSM 17093 chromosome, complete genomethioredoxin4e-1063.5
NC_011026:3009500:301487330148733015193321Chloroherpeton thalassium ATCC 35110, complete genomethioredoxin5e-1063.2
NC_014210:144036:146933146933147280348Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,thioredoxin5e-1063.2
NC_010793:30488:391713917139497327Orientia tsutsugamushi str. Ikeda, complete genomethioredoxin8e-1062.4
NC_009465:938378:943888943888944310423Candidatus Vesicomyosocius okutanii HA, complete genomethioredoxin1e-0962
NC_008261:2920999:293669729366972937011315Clostridium perfringens ATCC 13124, complete genomethioredoxin1e-0962
NC_013929:2696648:270306927030692703395327Streptomyces scabiei 87.22 chromosome, complete genomethioredoxin1e-0962
NC_014960:1670778:168546616854661685819354Anaerolinea thermophila UNI-1, complete genomethioredoxin1e-0962
NC_009665:4675289:469803446980344698360327Shewanella baltica OS185 chromosome, complete genomethioredoxin1e-0962
NC_014328:4387303:440454044045404404857318Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative thioredoxin1e-0961.6
NC_015873:790961:806686806686807006321Megasphaera elsdenii DSM 20460, complete genomethioredoxin1e-0961.6
NC_018750:3964784:398081139808113981134324Streptomyces venezuelae ATCC 10712, complete genomeThioredoxin1e-0961.6
NC_008048:389645:414851414851415291441Sphingopyxis alaskensis RB2256, complete genomethioredoxin1e-0961.6
NC_012673:2535427:258217825821782582492315Exiguobacterium sp. AT1b, complete genomethioredoxin2e-0961.2
NC_007799:186000:205658205658205981324Ehrlichia chaffeensis str. Arkansas, complete genomethioredoxin2e-0961.2
NC_014910:4316706:431767643176764318584909Alicycliphilus denitrificans BC chromosome, complete genomethioredoxin2e-0961.2
NC_004461:813748:833409833409833723315Staphylococcus epidermidis ATCC 12228, complete genomethioredoxin2e-0960.8
NC_002976:707827:727476727476727790315Staphylococcus epidermidis RP62A, complete genomethioredoxin2e-0960.8
NC_012115:1415827:142686214268621427182321Nautilia profundicola AmH, complete genomethioredoxin3e-0960.5
NC_015564:4727630:473037047303704730690321Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomethioredoxin3e-0960.5
NC_019908:1467000:148643014864301486747318Brachyspira pilosicoli P43/6/78 chromosome, complete genomethioredoxin4e-0960.1
NC_018607:2375344:239415123941512394468318Brachyspira pilosicoli B2904 chromosome, complete genomethioredoxin4e-0960.1
NC_014828:107802:131356131356131679324Ethanoligenens harbinense YUAN-3 chromosome, complete genomethioredoxin4e-0960.1
NC_007512:865500:868511868511868816306Pelodictyon luteolum DSM 273, complete genomeThioredoxin4e-0960.1
NC_009464:1804791:182452218245221824857336Uncultured methanogenic archaeon RC-I, complete genomethioredoxin5e-0960.1
NC_004369:2968251:299517429951742995728555Corynebacterium efficiens YS-314, complete genomeputative thioredoxin6e-0959.7
NC_008148:2290806:230989923098992310210312Rubrobacter xylanophilus DSM 9941, complete genomethioredoxin6e-0959.7
NC_008571:3165143:318375931837593184076318Gramella forsetii KT0803, complete genomethioredoxin5e-0959.7
NC_015760:2009425:201342720134272013741315Streptococcus salivarius CCHSS3, complete genomethiol-disulfide isomerase and thioredoxins6e-0959.3
NC_017275:1635959:166325316632531663654402Sulfolobus islandicus HVE10/4 chromosome, complete genomethioredoxin6e-0959.3
NC_013769:1705500:173220517322051732606402Sulfolobus islandicus L.D.8.5 chromosome, complete genomethioredoxin6e-0959.3
NC_012726:1611936:163917216391721639573402Sulfolobus islandicus M.16.4 chromosome, complete genomethioredoxin6e-0959.3
NC_009952:3596399:362359736235973623917321Dinoroseobacter shibae DFL 12, complete genomethioredoxin7e-0959.3
NC_011894:3988500:400935740093574009680324Methylobacterium nodulans ORS 2060, complete genomethioredoxin8e-0959.3
NC_011894:5056901:508773850877385088061324Methylobacterium nodulans ORS 2060, complete genomethioredoxin1e-0858.9
NC_013521:4240468:424347642434764243817342Sanguibacter keddieii DSM 10542, complete genomethioredoxin1e-0858.9
NC_014550:3839389:384451338445133844836324Arthrobacter arilaitensis Re117, complete genomethioredoxin1e-0858.5
NC_006905:2805877:280587728058772806296420Salmonella enterica subsp. enterica serovar Choleraesuis strthioredoxin 2, redox factor1e-0858.5
NC_010102:283364:302564302564302983420Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0858.5
NC_011080:2789744:279098527909852791404420Salmonella enterica subsp. enterica serovar Newport str. SL254,putative thioredoxin1e-0858.5
NC_011149:2701916:270191627019162702335420Salmonella enterica subsp. enterica serovar Agona str. SL483,putative thioredoxin1e-0858.5
NC_006449:1606948:160882216088221609136315Streptococcus thermophilus CNRZ1066, complete genomethioredoxin2e-0858.2
NC_006448:1604627:160650116065011606815315Streptococcus thermophilus LMG 18311, complete genomethioredoxin2e-0858.2
NC_013009:809681:818107818107818415309Neorickettsia risticii str. Illinois, complete genomethioredoxin2e-0858.2
NC_011884:1998559:201983120198312020169339Cyanothece sp. PCC 7425, complete genomeThioredoxin domain protein2e-0858.2
NC_009664:1434974:143980414398041440253450Kineococcus radiotolerans SRS30216, complete genomethioredoxin2e-0858.2
CP002185:2889656:288965628896562890075420Escherichia coli W, complete genomethioredoxin 21e-0858.2
CP002516:1196000:121578112157811216200420Escherichia coli KO11, complete genomethioredoxin1e-0858.2
CU928160:2785792:278579227857922786211420Escherichia coli IAI1 chromosome, complete genomethioredoxin 21e-0858.2
NC_008390:2156188:217406821740682174397330Burkholderia cepacia AMMD chromosome 1, complete sequencethioredoxin2e-0857.8
NC_010519:275976:299712299712300035324Haemophilus somnus 2336 chromosome, complete genomethioredoxin2e-0857.8
NC_007948:3541987:356307035630703563507438Polaromonas sp. JS666, complete genomethioredoxin3e-0857.4
NC_015759:726612:738847738847739161315Weissella koreensis KACC 15510 chromosome, complete genomethioredoxin5e-0856.6
NC_002677:3253057:3258250325825032596261377Mycobacterium leprae TN, complete genomebifunctional thioredoxin reductase/thioredoxin5e-0856.6
NC_011896:3252925:3258118325811832594941377Mycobacterium leprae Br4923, complete genomebifunctional thioredoxin reductase/thioredoxin5e-0856.6
NC_007519:3355768:337799233779923378432441Desulfovibrio alaskensis G20 chromosome, complete genomethioredoxin5e-0856.6
NC_009256:2945059:294505929450592945904846Burkholderia vietnamiensis G4 chromosome 1, complete sequencethioredoxin4e-0856.6
NC_003198:2703013:270425427042542704673420Salmonella enterica subsp. enterica serovar Typhi str. CT18,thioredoxin 25e-0856.2
NC_004631:283289:300176300176300595420Salmonella enterica subsp. enterica serovar Typhi Ty2, completethioredoxin 25e-0856.2
NC_017059:967309:967309967309968235927Rhodospirillum photometricum DSM 122, complete genomeThioredoxin-related6e-0856.2
NC_008711:4579997:458497445849744585300327Arthrobacter aurescens TC1, complete genome9e-0855.8
NC_018531:4718904:472392747239274724253327Arthrobacter sp. Rue61a chromosome, complete genomethioredoxin TrxA9e-0855.8
NC_010804:996837:100678010067801007217438Burkholderia multivorans ATCC 17616 chromosome 1, completethioredoxin 28e-0855.8
NC_010084:2484000:251755625175562517993438Burkholderia multivorans ATCC 17616 chromosome 1, completethioredoxin8e-0855.8
NC_017030:7557295:757744875774487577774327Corallococcus coralloides DSM 2259 chromosome, complete genomethioredoxin7e-0855.8
NC_007794:262402:284887284887285792906Novosphingobium aromaticivorans DSM 12444, complete genomethioredoxin2e-0754.3
NC_020291:1149887:117097411709741171285312Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomethioredoxin TrxA3e-0754.3
NC_013205:1275012:130219913021991302540342Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,thioredoxin6e-0753.1
NC_013170:1020339:102392210239221024230309Cryptobacterium curtum DSM 15641, complete genomethioredoxin6e-0753.1
NC_014960:3375807:338872233887223389558837Anaerolinea thermophila UNI-1, complete genomeputative thioredoxin6e-0753.1
NC_016627:689406:6936776936776949571281Clostridium clariflavum DSM 19732 chromosome, complete genomethioredoxin-disulfide reductase7e-0752.8
NC_014828:637523:641268641268641591324Ethanoligenens harbinense YUAN-3 chromosome, complete genomethioredoxin7e-0752.8
NC_020541:2850831:285083128508312851274444Rhodanobacter sp. 2APBS1, complete genomethioredoxin7e-0752.8
NC_014334:267409:281451281451281783333Lactobacillus casei str. Zhang chromosome, complete genomethiol-disulfide isomerase and thioredoxin7e-0752.8
NC_010999:252605:263900263900264214315Lactobacillus casei, complete genomeThioredoxin (Trx)6e-0752.8
NC_016027:1647110:1693899169389916949601062Gluconacetobacter xylinus NBRC 3288, complete genomethioredoxin6e-0752.8
NC_008526:250000:264629264629264943315Lactobacillus casei ATCC 334, complete genomeThiol-disulfide isomerase and thioredoxin6e-0752.8
NC_015320:160792:177193177193177513321Archaeoglobus veneficus SNP6 chromosome, complete genomethioredoxin1e-0652
NC_015312:3675148:372497937249793725365387Pseudonocardia dioxanivorans CB1190 chromosome, complete genomethioredoxin1e-0652
NC_012721:1986436:1989409198940919906471239Burkholderia glumae BGR1 chromosome 2, complete genomeThioredoxin1e-0652
NC_012522:7837071:784619778461977846568372Rhodococcus opacus B4, complete genomethioredoxin1e-0652
NC_008618:1704462:170745817074581707862405Bifidobacterium adolescentis ATCC 15703, complete genomethioredoxin1e-0652
NC_010572:802269:818836818836819234399Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative thioredoxin1e-0651.6
NC_013929:9450747:945339294533929453841450Streptomyces scabiei 87.22 chromosome, complete genomethioredoxin 21e-0651.6
NC_007333:3244572:325046732504673250844378Thermobifida fusca YX, complete genomethioredoxin1e-0651.6
NC_011886:4376261:438368343836834384009327Arthrobacter chlorophenolicus A6, complete genomethioredoxin2e-0651.2
NC_007633:952728:966122966122966430309Mycoplasma capricolum subsp. capricolum ATCC 27343, completethioredoxin3e-0650.4
NC_014751:946155:959581959581959889309Mycoplasma leachii PG50 chromosome, complete genomethioredoxin3e-0650.4
NC_011059:921690:942818942818943132315Prosthecochloris aestuarii DSM 271, complete genomeThioredoxin domain3e-0650.4
NC_013510:3065000:308071430807143081067354Thermomonospora curvata DSM 43183, complete genomethioredoxin4e-0650.4
NC_014215:1929000:194297019429701943395426Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Thioredoxin4e-0650.4
NC_008818:1127575:113715511371551137580426Hyperthermus butylicus DSM 5456, complete genomepredicted Thioredoxin5e-0649.7
NC_006055:183823:208059208059208367309Mesoplasma florum L1, complete genomethioredoxin5e-0649.7
NC_013131:7401253:742255874225587423040483Catenulispora acidiphila DSM 44928, complete genomethioredoxin7e-0649.3
NC_008541:4679022:468637946863794686705327Arthrobacter sp. FB24 chromosome 1, complete sequencethioredoxin8e-0649.3
NC_015311:2489176:249297524929752493289315Prevotella denticola F0289 chromosome, complete genomethioredoxin9e-0648.9