Pre_GI: BLASTP Hits

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Query: NC_013315:2232339:2246673 Clostridium difficile CD196 chromosome, complete genome

Start: 2246673, End: 2247887, Length: 1215

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013316:2309694:2327227232722723284411215Clostridium difficile R20291, complete genomediaminopropionate ammonia-lyase0793
NC_017179:3540739:3556679355667935578931215Clostridium difficile BI1, complete genomediaminopropionate ammonia-lyase0713
NC_013315:3532721:3548661354866135498751215Clostridium difficile CD196 chromosome, complete genomediaminopropionate ammonia-lyase0713
NC_010723:575254:5884415884415896491209Clostridium botulinum E3 str. Alaska E43, complete genomediaminopropionate ammonia-lyase7e-160563
NC_010674:615963:6243366243366255441209Clostridium botulinum B str. Eklund 17B, complete genomediaminopropionate ammonia-lyase8e-160563
NC_021182:401129:4124084124084136341227Clostridium pasteurianum BC1, complete genomediaminopropionate ammonia-lyase5e-136484
NC_017243:2190000:2221022222102222222151194Brachyspira intermedia PWS/A chromosome, complete genomediaminopropionate ammonia-lyase2e-134479
NC_012225:47800:7087570875720681194Brachyspira hyodysenteriae WA1, complete genomediaminopropionate ammonia-lyase8e-134477
NC_014150:2994000:3007634300763430088271194Brachyspira murdochii DSM 12563 chromosome, complete genomediaminopropionate ammonia-lyase6e-133474
NC_014330:768232:8023458023458035381194Brachyspira pilosicoli 95/1000 chromosome, complete genomediaminopropionate ammonia-lyase DpaL9e-133473
NC_018604:2253539:2265135226513522663281194Brachyspira pilosicoli WesB complete genomediaminopropionate ammonia-lyase DpaL9e-133473
NC_019908:2401577:2417563241756324187561194Brachyspira pilosicoli P43/6/78 chromosome, complete genomediaminopropionate ammonia-lyase1e-132473
NC_011294:1006630:1009010100901010102241215Salmonella enterica subsp. enterica serovar Enteritidis strdiaminopropionate ammonia-lyase2e-109396
NC_019978:1022209:1027061102706110282901230Halobacteroides halobius DSM 5150, complete genomediaminopropionate ammonia-lyase2e-109395
NC_016642:1234500:1234792123479212360391248Pseudovibrio sp. FO-BEG1 chromosome, complete genomeDiaminopropionate ammonia-lyase1e-102373
NC_011751:3285646:3330070333007033312661197Escherichia coli UMN026 chromosome, complete genomediaminopropionate ammonia-lyase1e-100366
AC_000091:2976293:3006166300616630073621197Escherichia coli W3110 DNA, complete genome2,3-diaminopropionate ammonia-lyase1e-100366
CP002185:3167738:3204559320455932057551197Escherichia coli W, complete genome2,3-diaminopropionate ammonia-lyase1e-100366
CU928160:3030324:3065766306576630669621197Escherichia coli IAI1 chromosome, complete genome2,3-diaminopropionate ammonia-lyase1e-100366
NC_010473:3069529:3099402309940231005981197Escherichia coli str. K-12 substr. DH10B, complete genome2,3-diaminopropionate ammonia-lyase1e-100366
CU928145:3196173:3231651323165132328471197Escherichia coli 55989 chromosome, complete genome2,3-diaminopropionate ammonia-lyase1e-100366
NC_007384:3151344:3177205317720531784011197Shigella sonnei Ss046, complete genomeputative dehydratase2e-100366
NC_002655:3769643:3813147381314738143431197Escherichia coli O157:H7 EDL933, complete genomediaminopropionate ammonia-lyase2e-100366
NC_000913:2975659:3005532300553230067281197Escherichia coli K12, complete genomediaminopropionate ammonia-lyase1e-100366
NC_002695:3702344:3745841374584137470371197Escherichia coli O157:H7 str. Sakai, complete genomediaminopropionate ammonia-lyase1e-100366
NC_011750:3407500:3434796343479634359921197Escherichia coli IAI39 chromosome, complete genomediaminopropionate ammonia-lyase1e-100366
NC_013941:3540420:3569845356984535710411197Escherichia coli O55:H7 str. CB9615 chromosome, complete genomediaminopropionate ammonia-lyase1e-100366
NC_013364:3552284:3587735358773535889311197Escherichia coli O111:H- str. 11128, complete genome2,3-diaminopropionate ammonia-lyase1e-100366
NC_013008:3761467:3804964380496438061601197Escherichia coli O157:H7 str. TW14359 chromosome, complete genomediaminopropionate ammonia-lyase1e-100366
NC_012759:2862807:2892680289268028938761197Escherichia coli BW2952 chromosome, complete genomediaminopropionate ammonia-lyase1e-100366
NC_011741:3030324:3065766306576630669621197Escherichia coli IAI1 chromosome, complete genomediaminopropionate ammonia-lyase1e-100366
NC_011415:3217796:3253236325323632544321197Escherichia coli SE11 chromosome, complete genomediaminopropionate ammonia-lyase1e-100366
NC_011353:3805819:3850238385023838514341197Escherichia coli O157:H7 str. EC4115 chromosome, complete genomediaminopropionate ammonia-lyase1e-100366
NC_011748:3196173:3231651323165132328471197Escherichia coli 55989, complete genomediaminopropionate ammonia-lyase1e-100366
NC_020272:3396800:3422476342247634236721197Bacillus amyloliquefaciens IT-45, complete genomediaminopropionate ammonia-lyase6e-95348
NC_011894:5751417:5773052577305257742451194Methylobacterium nodulans ORS 2060, complete genomediaminopropionate ammonia-lyase3e-60232
NC_008578:1827605:1837635183763518388431209Acidothermus cellulolyticus 11B, complete genomePyridoxal-5'-phosphate-dependent enzyme, beta subunit7e-55214
NC_008148:3024867:3029834302983430310241191Rubrobacter xylanophilus DSM 9941, complete genomePyridoxal-5'-phosphate-dependent enzyme, beta subunit8e-51201
NC_012527:288207:3046123046123057601149Deinococcus deserti VCD115 plasmid 1, complete sequencediaminopropionate ammonia-lyase1e-49197
NC_007205:1232734:1251973125197312531151143Candidatus Pelagibacter ubique HTCC1062, complete genomediaminopropionate ammonia-lyase1e-45184
NC_016614:1152500:1153722115372211549091188Vibrio sp. EJY3 chromosome 2, complete sequencediaminopropionate ammonia-lyase1e-44181
NC_009142:5425763:5443600544360054447571158Saccharopolyspora erythraea NRRL 2338, complete genomepyridoxal-5'-phosphate-dependent enzyme, beta subunit1e-44181
NC_008392:1029134:1052569105256910537951227Burkholderia cepacia AMMD chromosome 3, complete sequenceDiaminopropionate ammonia-lyase8e-41168
NC_010557:679656:7209977209977222231227Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceDiaminopropionate ammonia-lyase9e-41167
NC_018643:857911:8787698787698799201152Alpha proteobacterium HIMB5 chromosome, complete genomePyridoxal-phosphate dependent enzyme1e-39164
NC_007948:1972290:197429419742941974911618Polaromonas sp. JS666, complete genome2e-1790.1
NC_008025:1889891:1910418191041819119621545Deinococcus geothermalis DSM 11300, complete genomethreonine dehydratase, biosynthetic2e-1170.9
NC_006177:3457637:3457637345763734588691233Symbiobacterium thermophilum IAM 14863, complete genomethreonine dehydratase4e-1169.7
NC_014471:1269571:1295882129588212971141233Ignisphaera aggregans DSM 17230 chromosome, complete genomethreonine dehydratase5e-1065.9
NC_008528:610070:6213536213536227741422Oenococcus oeni PSU-1, complete genomeThreonine dehydratase1e-0964.7
NC_008027:4280000:429977642997764300741966Pseudomonas entomophila L48, complete genomethreonine dehydratase2e-0963.9
NC_019974:3013338:3022611302261130238641254Natronococcus occultus SP4, complete genomethreonine dehydratase, medium form3e-0756.6
NC_007516:1323105:1344199134419913457281530Synechococcus sp. CC9605, complete genomethreonine dehydratase5e-0756.2
NC_009523:5522447:552326955232695524234966Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein4e-0756.2
NC_014221:3068222:309087630908763091868993Truepera radiovictrix DSM 17093 chromosome, complete genomePyridoxal-5'-phosphate-dependent protein beta subunit7e-0755.5
NC_009512:5632591:5683202568320256847161515Pseudomonas putida F1, complete genomethreonine dehydratase, biosynthetic7e-0755.5
NC_012121:1578190:1584304158430415855721269Staphylococcus carnosus subsp. carnosus TM300, complete genomethereonine dehydratase1e-0655.1
NC_012815:1862373:1882633188263318838711239Bifidobacterium animalis subsp. lactis DSM 10140, complete genomethreonine dehydratase1e-0654.7
NC_009831:5107924:5116129511612951176791551Shewanella sediminis HAW-EB3, complete genomethreonine dehydratase, biosynthetic2e-0654.3
NC_007760:3948730:3964874396487439660851212Anaeromyxobacter dehalogenans 2CP-C, complete genomethreonine dehydratase2e-0654.3
NC_003413:37233:383333833339247915Pyrococcus furiosus DSM 3638, complete genomethreonine synthase2e-0653.9
NC_013192:1824174:1833585183358518348021218Leptotrichia buccalis DSM 1135, complete genomethreonine dehydratase4e-0653.1
NC_017093:835260:8542838542838555421260Actinoplanes missouriensis 431, complete genomeputative threonine dehydratase5e-0652.8
NC_010506:537833:5487985487985503481551Shewanella woodyi ATCC 51908, complete genomethreonine dehydratase, biosynthetic5e-0652.8
NC_005061:647567:6570996570996586431545Candidatus Blochmannia floridanus, complete genomethreonine dehydratase5e-0652.4
NC_008698:560529:5639355639355651611227Thermofilum pendens Hrk 5, complete genomethreonine dehydratase5e-0652.4
NC_008319:1272251:1289874128987412914001527Synechococcus sp. CC9311, complete genomethreonine dehydratase6e-0652.4
NC_009053:1668500:1668513166851316700391527Actinobacillus pleuropneumoniae L20, complete genomethreonine dehydratase biosynthetic7e-0652.4
NC_010278:1625695:1625695162569516272211527Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,threonine dehydratase7e-0652
NC_011999:936500:9398359398359410971263Macrococcus caseolyticus JCSC5402, complete genomethereonine dehydratase9e-0651.6
NC_013520:1638000:1658845165884516600681224Veillonella parvula DSM 2008, complete genomethreonine dehydratase9e-0651.6