Pre_GI: BLASTP Hits

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Query: NC_013315:1679000:1679555 Clostridium difficile CD196 chromosome, complete genome

Start: 1679555, End: 1680328, Length: 774

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015437:1494777:150309515030951503838744Selenomonas sputigena ATCC 35185 chromosome, complete genomeprophage antirepressor1e-54213
NC_017179:1683199:168852816885281689337810Clostridium difficile BI1, complete genomehypothetical protein1e-49196
NC_014393:4323368:434092443409244341685762Clostridium cellulovorans 743B chromosome, complete genomeprophage antirepressor9e-36150
NC_015913:1248000:125915312591531259932780Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeprophage antirepressor1e-31136
NC_014136:1879049:188225618822561882960705Leuconostoc kimchii IMSNU11154 chromosome, complete genomeputative antirepressor - phage associated8e-31134
NC_017337:1107930:111257511125751113288714Staphylococcus aureus subsp. aureus ED133 chromosome, completeprophage, antirepressor, putative2e-29129
NC_012658:1810640:181229818122981813038741Clostridium botulinum Ba4 str. 657 chromosome, complete genomeantirepressor, phage associated3e-29129
NC_017167:1648913:168576016857601686524765Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1prophage antirepressor4e-29128
NC_010609:880196:883218883218883991774Lactobacillus reuteri JCM 1112, complete genomephage antirepressor8e-27120
NC_009513:870837:873859873859874632774Lactobacillus reuteri F275, complete genomeprophage antirepressor8e-27120
NC_009332:1269000:130504913050491305810762Streptococcus pyogenes str. Manfredo chromosome, complete genomephage antirepressor protein1e-26120
NC_003485:579946:582257582257583018762Streptococcus pyogenes MGAS8232, complete genomeputative antirepressor1e-26120
NC_003212:57061:810818108181854774Listeria innocua Clip11262, complete genomehypothetical protein2e-26119
NC_004606:1107500:114213011421301142849720Streptococcus pyogenes SSI-1, complete genomeputative antirepressor (phage associated)2e-25116
NC_003485:296140:298577298577299296720Streptococcus pyogenes MGAS8232, complete genomeputative antirepressor2e-25116
NC_004070:747146:753907753907754626720Streptococcus pyogenes MGAS315, complete genomeputative antirepressor - phage associated2e-25116
NC_002951:351029:358916358916359707792Staphylococcus aureus subsp. aureus COL, complete genomeprophage L54a, antirepressor, putative5e-24111
NC_007622:1842000:188313418831341883922789Staphylococcus aureus RF122, complete genomephage anti-repressor protein5e-24111
NC_007795:1922000:196176119617611962552792Staphylococcus aureus subsp. aureus NCTC 8325, complete genomebacteriophage L54a, antirepressor, putative6e-24111
NC_021064:816000:817740817740818504765Propionibacterium avidum 44067, complete genomeBro family antirepressor1e-23110
NC_015975:752927:771303771303772091789Lactobacillus ruminis ATCC 27782 chromosome, complete genomeProphage antirepressor1e-23110
NC_002758:918827:921437921437922216780Staphylococcus aureus subsp. aureus Mu50, complete genomesimilar to anti-repressor8e-24110
NC_009782:920272:922882922882923661780Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein8e-24110
NC_017351:643674:647068647068647856789Staphylococcus aureus subsp. aureus 11819-97 chromosome, completephage antirepressor KilAC domain protein6e-24110
NC_018704:176088:194458194458195210753Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein2e-23109
NC_009513:1184000:119712311971231197926804Lactobacillus reuteri F275, complete genomephage antirepressor protein2e-23109
NC_017986:5509569:552276155227615523573813Pseudomonas putida ND6 chromosome, complete genomeBRO domain protein3e-23108
NC_012121:474144:477436477436478203768Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative antirepressor, phage associated3e-23108
NC_010002:3547958:355748635574863558298813Delftia acidovorans SPH-1, complete genomeprophage antirepressor8e-23107
NC_017167:2298962:236904623690462369672627Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1prophage antirepressor3e-22105
NC_008525:1013979:102618110261811026984804Pediococcus pentosaceus ATCC 25745, complete genomeUncharacterized phage-encoded protein1e-21103
NC_013173:953633:978862978862979515654Desulfomicrobium baculatum DSM 4028, complete genomeprophage antirepressor9e-22103
NC_015913:117966:118931118931119551621Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomephage antirepressor9e-22103
NC_004369:868890:880230880230881018789Corynebacterium efficiens YS-314, complete genomehypothetical protein3e-21102
NC_010320:1268355:127709412770941277885792Thermoanaerobacter sp. X514 chromosome, complete genomeprophage antirepressor1e-20100
NC_009495:2479465:251890425189042519704801Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeBRO family protein4e-2098.2
NC_002655:1655944:166116416611641662042879Escherichia coli O157:H7 EDL933, complete genomeputative antirepressor protein encoded by prophage CP-933N6e-2097.8
NC_002695:1571389:157719015771901578068879Escherichia coli O157:H7 str. Sakai, complete genomeputative antirepressor protein6e-2097.8
NC_011353:1513000:151811815181181518996879Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeantirepressor protein6e-2097.8
NC_013008:1513000:151840615184061519284879Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeantirepressor protein encoded by prophage CP-933N6e-2097.8
NC_016799:167362:181688181688182506819Corynebacterium diphtheriae 31A chromosome, complete genomeputative anti-repressor protein2e-1995.9
NC_011001:2085986:209670520967052097502798Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein2e-1995.9
NC_010645:1496816:1513524151352415146481125Bordetella avium 197N, complete genomephage protein6e-1994.7
NC_013174:2321000:232849123284912329225735Jonesia denitrificans DSM 20603, complete genomephage antirepressor protein8e-1994.4
NC_003485:1061344:106346110634611064204744Streptococcus pyogenes MGAS8232, complete genomeputative antirepressor1e-1894
NC_008595:771753:791751791751792539789Mycobacterium avium 104, complete genomegp54 protein1e-1893.6
NC_004129:4333302:434864343486434349527885Pseudomonas fluorescens Pf-5, complete genomeprobable phage protein1e-1893.6
NC_014011:1139818:115821711582171158990774Aminobacterium colombiense DSM 12261 chromosome, complete genomeprophage antirepressor2e-1893.2
NC_016077:1944000:194682219468221947619798Acidaminococcus intestini RyC-MR95 chromosome, complete genomeprophage antirepressor2e-1893.2
NC_010577:1188438:121324012132401214028789Xylella fastidiosa M23, complete genomeprophage antirepressor3e-1892
NC_004556:1178897:120370012037001204488789Xylella fastidiosa Temecula1, complete genomehypothetical protein3e-1892
NC_007298:3764048:377102537710253771624600Dechloromonas aromatica RCB, complete genomeBRO, N-terminal4e-1891.7
NC_009012:2927793:293490029349002935646747Clostridium thermocellum ATCC 27405, complete genomeBRO-like protein5e-1891.3
NC_014328:303063:355534355534356307774Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative prophage antirepressor2e-1789.4
NC_017208:694500:707763707763708560798Bacillus thuringiensis serovar chinensis CT-43 chromosome, completehypothetical protein4e-1788.6
NC_016627:4323370:436118343611834362004822Clostridium clariflavum DSM 19732 chromosome, complete genomeprophage antirepressor4e-1788.6
NC_010655:1606901:163592716359271636721795Akkermansia muciniphila ATCC BAA-835, complete genomeprophage antirepressor4e-1788.6
NC_006087:2439252:245342124534212454203783Leifsonia xyli subsp. xyli str. CTCB07, complete genomeprophage antirepressor protein5e-1788.2
NC_007298:2689731:271017927101792710697519Dechloromonas aromatica RCB, complete genomeBRO, N-terminal6e-1787.8
NC_012559:1685812:169887816988781699522645Laribacter hongkongensis HLHK9, complete genomePhage associated-antirepressor7e-1787.8
NC_015052:1030708:104657610465761047355780Bifidobacterium longum subsp. infantis 157F, complete genomephage antirepressor1e-1687
NC_015164:3997743:401090140109014011752852Bacteroides salanitronis DSM 18170 chromosome, complete genomeprophage antirepressor1e-1686.7
NC_009012:1934107:197448919744891975286798Clostridium thermocellum ATCC 27405, complete genomeBRO-like protein2e-1686.3
NC_007434:1712000:174098017409801741699720Burkholderia pseudomallei 1710b chromosome I, complete sequenceBRO family, N-terminal domain protein2e-1686.3
NC_016809:1778000:178241417824141783043630Haemophilus influenzae 10810, complete genomehypothetical protein3e-1685.5
NC_014836:1606587:1617241161724116188571617Desulfurispirillum indicum S5 chromosome, complete genomeBRO domain-containing protein3e-1685.5
NC_020181:5384015:539231953923195392948630Enterobacter aerogenes EA1509E, complete genomeputative antirepressor protein6e-1684.3
NC_014836:1551965:1564262156426215657971536Desulfurispirillum indicum S5 chromosome, complete genomeBRO domain-containing protein2e-1583.2
NC_007712:1791766:181320518132051813984780Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-1582.4
NC_010322:3831444:383713438371343837988855Pseudomonas putida GB-1 chromosome, complete genomeprophage antirepressor4e-1582
NC_012985:1:228522853073789Candidatus Liberibacter asiaticus str. psy62, complete genomeprophage antirepressor3e-1582
NC_012985:1191125:228522853073789Candidatus Liberibacter asiaticus str. psy62, complete genomeprophage antirepressor3e-1582
NC_014219:830966:852587852587853432846Bacillus selenitireducens MLS10 chromosome, complete genomeprophage antirepressor4e-1581.6
NC_014774:1210004:123948712394871240272786Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeprophage antirepressor5e-1581.6
NC_012522:4299287:432161943216194322419801Rhodococcus opacus B4, complete genomehypothetical protein5e-1581.6
NC_015520:2974048:299950229995023000302801Mahella australiensis 50-1 BON chromosome, complete genomeprophage antirepressor6e-1581.3
NC_014624:1840209:186105118610511861893843Eubacterium limosum KIST612 chromosome, complete genomeprophage antirepressor7e-1581.3
NC_014774:171500:198615198615199403789Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeprophage antirepressor7e-1580.9
NC_017219:1680344:168201016820101682789780Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative phage antirepressor1e-1480.1
NC_011593:1680215:168222016822201682999780Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,phage antirepressor protein1e-1480.1
NC_010645:1496816:150123515012351501984750Bordetella avium 197N, complete genomeantirepressor2e-1479.7
NC_010645:406794:409618409618410367750Bordetella avium 197N, complete genomehypothetical protein2e-1479.7
NC_008595:771753:792643792643793434792Mycobacterium avium 104, complete genomegp54 protein2e-1479.7
NC_016812:463000:473558473558474010453Sinorhizobium fredii HH103, complete genomehypothetical protein6e-1478.2
NC_009706:1972000:198827419882741989077804Clostridium kluyveri DSM 555 chromosome, complete genomeprophage antirepressor6e-1478.2
NC_015164:3099097:312458831245883125337750Bacteroides salanitronis DSM 18170 chromosome, complete genomeprophage antirepressor1e-1377.4
NC_011035:541560:560415560415561260846Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative phage associated protein1e-1377.4
NC_014774:1210004:125044412504441251238795Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeprophage antirepressor1e-1377.4
NC_016629:2784000:279279427927942793540747Desulfovibrio africanus str. Walvis Bay chromosome, completeprophage antirepressor9e-1477.4
NC_002939:1866651:187870118787011879006306Geobacter sulfurreducens PCA, complete genomeBRO family protein, truncation1e-1377
NC_013205:1187812:120833612083361208785450Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,prophage antirepressor1e-1377
NC_014624:2878457:289492028949202895681762Eubacterium limosum KIST612 chromosome, complete genomephage antirepressor protein1e-1376.6
NC_003212:2413824:243981624398162440586771Listeria innocua Clip11262, complete genomehypothetical protein2e-1376.3
NC_016642:3286654:329768932976893298555867Pseudovibrio sp. FO-BEG1 chromosome, complete genomeprophage antirepressor2e-1375.9
NC_017511:522679:538774538774539100327Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative phage associated protein2e-1375.9
NC_015660:739040:742994742994743614621Geobacillus thermoglucosidasius C56-YS93 chromosome, completeprophage antirepressor3e-1375.9
NC_011883:269497:279541279541280083543Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,prophage antirepressor4e-1375.5
NC_002946:1020175:104444710444471045292846Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein, putative phage associated protein5e-1375.1
NC_014664:1614568:163430316343031635073771Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeprophage antirepressor5e-1374.7
NC_014541:1231021:123858012385801239362783Ferrimonas balearica DSM 9799 chromosome, complete genomeprophage antirepressor1e-1273.6
NC_017167:1648913:169987616998761700301426Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1prophage antirepressor5e-1271.6
NC_012969:1574330:158274215827421583101360Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeprophage antirepressor5e-1271.6
NC_007519:1782067:179635917963591796913555Desulfovibrio alaskensis G20 chromosome, complete genomeprophage antirepressor-like5e-1271.6
NC_007519:2773000:278776727877672788360594Desulfovibrio alaskensis G20 chromosome, complete genomeprophage antirepressor-like2e-1169.7
NC_007493:207932:215064215064215519456Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencehypothetical protein3e-1168.9
NC_009937:4122652:413458341345834135323741Azorhizobium caulinodans ORS 571, complete genomeputative prophage antirepressor3e-1168.9
NC_015857:265721:289264289264289686423Brucella pinnipedialis B2/94 chromosome chromosome 1, completeBRO family protein4e-1168.6
NC_014554:1821320:183285618328561833608753Lactobacillus plantarum subsp. plantarum ST-III chromosome,hypothetical protein4e-1168.6
NC_007519:2773000:279503627950362795353318Desulfovibrio alaskensis G20 chromosome, complete genomeprophage antirepressor-like2e-1066.2
NC_012917:4646491:465303746530374653615579Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeprophage antirepressor3e-1065.5
NC_014721:729942:739171739171739953783Caldicellulosiruptor kristjanssonii 177R1B chromosome, completephage antirepressor protein8e-1064.3
NC_015949:1719575:174530717453071746089783Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomephage antirepressor protein8e-1064.3
NC_011769:2016000:202683920268392027723885Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeprophage antirepressor2e-0963.2
NC_011837:1935294:195039419503941951242849Clostridium kluyveri NBRC 12016, complete genomehypothetical protein7e-0961.2
NC_012658:2525931:254229325422932543156864Clostridium botulinum Ba4 str. 657 chromosome, complete genomeanti-repressor9e-0960.8
NC_007298:2689731:270430027043002704476177Dechloromonas aromatica RCB, complete genomeBRO family protein1e-0653.5
NC_021182:554000:5577675577675588221056Clostridium pasteurianum BC1, complete genomeprophage antirepressor2e-0653.1
NC_004557:1141558:114155811415581142370813Clostridium tetani E88, complete genomekilA protein, putative phage-related DNA binding protein2e-0652.8
NC_007712:2897000:289757528975752898336762Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-0652.4
NC_007618:262415:286062286062286307246Brucella melitensis biovar Abortus 2308 chromosome I, complete4e-0652
NC_015433:1998427:200839220083922009138747Streptococcus suis ST3 chromosome, complete genomeprophage antirepressor6e-0651.2
NC_006932:266000:289515289515289940426Brucella abortus biovar 1 str. 9-941 chromosome I, complete9e-0650.8